Ll_transcript_303065

• Id Trinity: TRINITY_DN48279_c1_g4_i10
• Name Transcript: Ll_transcript_303065
• Sequence: CCCGATCTGTATTTCGGAACATATCGGGTACAAAAAGCACGAACCCTGCCTCGTTCTTCATCGTCGTTTTCTTTCGATCTTCCTATTTCTTTCTAATCAG TGTTCATAATTCTTAAATCGAGTCTCTTTTTCGTTCAATTCCTGTTATCTATTTCCGTTTGATCCTAAAATCAACCTTTTTGGTTATCCTTATCATTCTA GGGTTAGGGTTTGATCCGGACCTTCAATGCCACAAAATCTTCCTATCCACTTGTATATTCCGTTAATTTTCGTAGTTTTTGTTCTTATTCATTGATAATT TTGCCCCAATTTGATATATTATTTGTACGCGTTTCCAAATCTAGGGTTTCGAATCGATCGAAATTTTAGGTCTTTTCAATCTTCAAATCTCTTGAGGGTT TATGTAAATTATTTTAGGGGTTTGGTTCCTTCCCATCGTTTATGAAATTTCGCTGTCGTTTGGTTTTTAATTTCATCATTTTTGTGCAAATTGAGAGTCT AGGGTTAGGGTTTATAATTTAATTTTTAGGTTATTCTATTTTGTAAAATTGATTTGGGGATACACTTTTAGGGGTTGAGAAACTATCTTAATTGTCCAAT TCCTTGGCCAATTCTGCCTATTTAGGCTTTTGGAATTCCGTTTGACCTTTGAACTATTCTCCTTAGTGCTGCTTTGGCGGACTGTGTATAATTTGGATTT GAAAGTGTTGAGAAGAATAACAATGGGATATAAAAGATGTCTTGATGTCATTGAATTTGAGGATTTCTCTTTGAACAAGGCCAAACGACTTGAATCTGAC AATGAACTGCTTCCACTAACTGACAATTCGTTCGTGAAAACACTTATGTCAGGTAAATAGTATATATTATGTTTTAATCTGGTTGCTCTTTTTCAAGCAG AGTCAGTTTAAGTACCATTGGCCCAAATTGAAGATTTTGTTTGATAGTTTATGTATAATAAAGAATATTCTTCATTTATTATAAAGGTGACAATGAGGGT GGCTTTTACAATATTCAATGGTATGATGCTATTCCAGCAGACACTGCATTTGAAGCTCCTCCACCTGGTCACAGGAATGTTCACACCAGTGGTCCCATCG GCAGCTGGTCTAGTGAATATGATGCTGGGTCTGGGGCAACATCTTTGTCATCCACCTCTTCAGATTGCTTGGAATTTGATATTCCAAAGAAATCATATGA TGATGTGTATTCATCCCTTGATTGCTCCCCCAGAAAATCAGTTCCCGTGGGTCCAAATCATCAGGCTGTCCTTCCTGTCTGGAGTGGAAAAGAGAATAAG ATATCAAAGTTGGTCATATATAATGATGACATTCCATTCTCTGGTTTACTATCTATTAATACTGCTCATGACAATGAAGAGAGACTCATGGGGACTTCTG TGCTTCAGATGTCCGATTCTAGCTTTTATTCTTCTAAGGGTAACGAGGGTGGAGAAGGTAGATCAGAATGTAGCTGCCTGGATCAGGGATCCATCAGATG TGTTCGACAGCATGTTAGGGAAGCACGTGAAAATGTGAGGAGGACTCTTGGGATGGAAAATTTTGTGAACTTGGGCTTTTGTGACATGGGAGAGTACGTC GCACTCAAATGGGATGAAGACGAAGAAGAGGTTTTTCATGAGGTTGTCTATAGCAATCCTGCATCACTAGGAAGAAATTTTTGGAAGCATTTATCAGCAG CATTCCCTACTCGAACTAAGAAAGAAATTGTCAGCTACTACTTCAATGTTTTTATGCTTAGGAGAAGAGCTGCTCAGAATAGATCCAGATTTTTGGATAT TGACAGTGATGATGATGAATGCCATACAAGTGATCCACAGTTTTACGGTTATGAAAATTCAGGAGATGACTCTGGCATTGAGTCTCTTGATGATCAAGAT GTTCGTGTAGAAAACCAGGATTACTCTGATGAAGATGATGCCAACAGTGATGATGGCAATGAGTTTGCTGGATATAATATGGGAAACATCACCAAGGAGG AGAGTGAGATTGATCAAAGGTCCTTCAAATGCAAGGCTAACTCACAGATTGATAGTTGGAGTAATCCTAGTCAGCACCTTGATGGGACTCGAGGGATTCT CAAGGATGATTATGGTTCCAAGGATGATTCTTGCATGTCCTTTGAGTGTGATGCCAAAATGGATGTGTCTCGTTGTCATGGTTTGCTAGATGAGAGCATT TTGTCGCAAGGCAAGGATATTAAATGCGATCAGTCTCCAAGTGTGCCTGGTAAACTCGATATGCCCAGCCATGAGATAGAGGATAGTTATTTGTTGGAGC CCAGCGTTTCTAAAGATTGGTATCCTGCATACTCAACATTTCTCGATACAAATATAGATTTCTTACCTACTTCCAATTTGATAGACGAGTTTTTTGGCCT TGGTACTCCAGATAGAAAGACCAGAAGCGACTAAGGTTTTAACTCCGGTGATTTTTATGGCGTGGCATGTTTAATGTGCCCAATCGAGATTTAATAGATT GCAGTTGGTATCTGTTATTTTTAGAACTAGGAGGAGCTCCATGATGGTGTTTGAAGGTTTAGTTGTAAACAGTGGCCAAGGCTGGAATGGAAAACATTCT ATTGTTTATTAATCTGTTTTATTTATTTTCTTTTATGCCAGAGTAGAGGTTGATACATTTTTTGTTAATTTGTATATAGTTGAAGGGAGCCTCTCCCATT CCCAAAAGAAAATCGGGTTTACCTGTTTCTTTTTACCACCCCACAATTTGTATTCTAATGTAATGAAGAACGAGCTTGAATTGAATATCATCTCATATTC TTGTATTTTTGTGTGGTATACTGATATTCTATGCGTTTCTAAGTGATTATAACGTAATTCATTAAGTTTGTGCAGGTATCTTTTTGAAGTATTTTCATTC TCT
• Tissue: pods
• Gene name: LI_gene_159700;
• Additional information: details;

Expression of Ll_transcript_303065

FPKM

• PAB: 0.6
• PNAB: 1.7
• PS1: 0.6
• PS2: 0.2
• PS3: 0.4
• PW1: 0.8
• PW2: 1.5
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_303065

• Blastp: AT-rich interactive domain-containing protein 2 from Arabidopsis with 42.28% of identity
• Blastx: AT-rich interactive domain-containing protein 2 from Arabidopsis with 33.17% of identity
• Eggnog: NA(ENOG410YHCT)
• Kegg: Link to kegg annotations (AT4G11400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421894.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;