Id Trinity | TRINITY_DN48282_c4_g1_i11 |
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Name Transcript | Ll_transcript_303225 |
Sequence | TGAATGACAAATTCTTATGAAAGATGGTAAGTTAATAACGAATTAAACCAATCAATTTAAAAGTAAATTTGTGTCCATTCACAAATCAAACAAAAAGAGT AAAAAAATATTGACTTAAGGTTGAGGACAAGAACAAGTACCAAATAACATGAAAAAGCAATAGAAACAGCAATCTTTAGAATCAGAAAGATCCTCTTCCT CTTCCTCTCTCTCTCTCAGTAGTGAATGGGTGGAAGATGGAGAACCGTTTCTCATCTTTTCAACCGCGTTGTTTCTTCACAATCCAACTTTCTTCTTCAC AACCGTTTTCTCAGTGCAGCACATTGCCATGTTGACCCGGACTCATATAACGGGCTTGGAGCCCCGGAACAAGACCCTACTGTTAAAATCCCTGTTAAAG CCTACTTCATTTCCACTAGTATAAATTTGAAGGGCATTCAGGCTGACAATCTGAGAAACATTGTTCCGCCATCTTCCCGCTCTTCATTAAACTATGTTGC CCTTCGGTTCTCTGAACATAATTCGGACACTAATGTAAGATATCCCCCCAGAATATTGTGTTTCTATGGAAGTTCATTTCTCGGCTTATAGTTCTCAAAT TTCTCTCCTTTTTCCATCATTTTGTGCGACACATGATTATTATTTGGTATCATTTGATAGACGTGTTTGAACGGGTCATACATGGTTTTATTCTATGTTT GGTGGATTTTATAAACAGAATAGAAAATAGAATAGGACATGAGGTTAAAAAGTGGGACATTAATGTCCTGTTCCTTTCCATCCATTCCATACTGTCAGTG TGTAAAACATTACTTCAGTAAACTCGAAGATCCCATACTATGTTGATGTTCCTCTCAGGGTACCATGTGCACCACCCAGTGCTTAATTAAGGGTACAGGG GCAGATTTCTAATAGGCCGGTGTCACTGAATTTGTGTGCATTTGAAAGTCCCGGGTGTAATAAGAGGAAATTCAGGCTTTATTGTCTGTCATGTATGCTG ATATCTCTTGTTTTTGGAATGGAAAGGGAGATGCTGAGTTGTATCCTAAATGACAATGTTTTTATCATTGATAATAAGTAAATAAATACAGGACTCAAGC ATTGGAAGGAAAATAATACTCCCTGGTTAAAAGCAGGACTCTTGTGTTACATGTACGAGAAAATCTGGTTAAATAAACTACTTTTACAATATAACAATAT GATTTATTTAACAATCTAAAAACTTGGGGCATTTGATCCAGGATCCTGGATTTCATGTGAAAGCAAGCAGCTGCCGTTACATGGTTGTATACCAGTATGG GTCTGCTGTCTTGTTTAATATCGAGGATCATGAAGTAGACCATTACCTGGAACTAGTTAAGAGGCATGCATCTGTTTTACTTCCAGAGATGACAAAAGAT GATTATGCAGTAAAGGAGAAGCCACAGTTAGTTGAGGACATGCAAGGAGGTCCGGACTACATAGTTCTCAAATCTTTGGACACTGATGGTATCCGTATAA TTGGAAGTGTGTTGGGACAAAGCATAGCTCTGGATTATTTTGTCTCACAGGTTGATCGTTTAGTTGAAGAGTTTGCAGGCATAAATCGTGGAATGGAAAA AACTGGAACTTTCACTATGGATAAAAAGAAGCTCCTTCAACTTGTTGGAAAGGCTAATTCACATTTGGCTGATGTGATTCTTAAAGTTGGTCTATTTGAG AGATCAGAAATTGCTTGGAGGGATGCAAAATATGCCCAAATATATGAATATCTTCGGGAGGAGTATGAAGTTGCGCAGCGCTTCGGAAACCTGGATTTCA AATTGAAATTCGTAGAGCATAATATTCATTTTCTCCAAGAAGTTCTCCAGAACAGGAAGTCAGATTTCTTGGAATGGTGCATTATTGGCCTATTGGCTAT TGAAAATGTTATATCCTTATATGAGATTCTTAAAGAATCAAATACAATTTCTTAGTAAGAAGTAAAAGAGGTTGACTCTAGATTAATTTATTCTAGCAAC AATTCATCCAATTTTTGAGCTAATCAAAGTTTTGCAATTTGTAGCCATGATAAATAAAATGCACACGCCCTAGTCTGCACTTTTATTCATAGAGCTGTAT GAAATTTATTGGTCACCAAGTTACTCATTCATTACATTTGTAGCTAGAATTTCATATTTTAATTGTACAATTTAGAAAGAATAATATGGGGATGTTGTAG AGTTTTCTTATCTTAAAAT BLAST |
Tissue | pods |
Gene name | LI_gene_159733; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_303225
Blastp | Sporulation protein RMD1 from Saccharomyces with 22.27% of identity |
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Blastx | Sporulation protein RMD1 from Saccharomyces with 22.27% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (YDL001W) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459305.1) |
Pfam | Uncharacterised ACR, YagE family COG1723 (PF02582.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |