Ll_transcript_303235

• Id Trinity: TRINITY_DN48282_c4_g1_i16
• Name Transcript: Ll_transcript_303235
• Sequence: TGAATGACAAATTCTTATGAAAGATGGTAAGTTAATAACGAATTAAACCAATCAATTTAAAAGTAAATTTGTGTCCATTCACAAATCAAACAAAAAGAGT AAAAAAATATTGACTTAAGGTTGAGGACAAGAACAAGTACCAAATAACATGAAAAAGCAATAGAAACAGCAATCTTTAGAATCAGAAAGATCCTCTTCCT CTTCCTCTCTCTCTCTCAGTAGTGAATGGGTGGAAGATGGAGAACCGTTTCTCATCTTTTCAACCGCGTTGTTTCTTCACAATCCAACTTTCTTCTTCAC AACCGTTTTCTCAGTGCAGCACATTGCCATGTTGACCCGGACTCATATAACGGGCTTGGAGCCCCGGAACAAGACCCTACTGTTAAAATCCCTGTTAAAG CCTACTTCATTTCCACTAGTATAAATTTGAAGGGCATTCAGGCTGACAATCTGAGAAACATTGTTCCGCCATCTTCCCGCTCTTCATTAAACTATGTTGC CCTTCGGTTCTCTGAACATAATTCGGACACTAATATTATGCAGTAAAGGAGAAGCCACAGTTAGTTGAGGACATGCAAGGAGGTCCGGACTACATAGTTC TCAAATCTTTGGACACTGATGGTATCCGTATAATTGGAAGTGTGTTGGGACAAAGCATAGCTCTGGATTATTTTGTCTCACAGGTTGATCGTTTAGTAGA GGAGTTTGCAGGCATAAATCGTGGAATGGAAAAAACTGGAACTTTCACTATGGATAAAAAGAAGCTCCTTCAACTTGTTGGAAAGGCTAATTCACATTTG GCTGATGTGATTCTTAAAGTCGGTCTATTTGAGAGATCAGAAATTGCATGGAGGGATGCAAAATATGCCCAAATATATGAGTATCTTCAGGAGGAGTATG AAGTTGCCCAACGCTTTGGAAACCTAGATTTCAAATTAAAATTCGTAGAGCACAATATTCATTTTCTCCAAGAAGTTCTCCAGAACAGGAAGTCAGATTT CTTGGAATGGTGCATTATTTGCCTATTGTCTATTGAAAATGTTATATCCTTCTATGAGATTCTTCACCAATCAAATACAATTTCTTAGTAAGAGCTAAGA GAGGTTGAATCTAGATTAATTTATTCTAGCAACAATTCATCCAATTTTTGAGGTAATCAAATTTTTGCACTATGTATTTATGATAAATAAAAACCACACA TCCCTGCCCGCGCTTTATTCATTGAGCTGCATGAAATTTACTGGATAATTTCATACTTAGTTTCTAAGAATAGCTAGATATATTGATCATAAGAGTATGG AAAAAGATTTCACCTTCCTTTCGGGAAGAGAGGATTATGAAAATCCTATTGATTATAATTTTCTCCCGGGGTATCAACTATGAGCTCGTTTGGTTGACGG ATAAGAAAGACATGATGAGACAATTTTGTCTTGTTGCAATCCAGAGTTTGGTGATCCTGCTGTTGGCATATCATATTTTGTTCACTTATTGTTTTTCTAT CTCACGGGGATATGATACTGTAATTTTCCCGTTATATCTTCACGCTTCAACACCACTGTCACCACCACTGCACTATCGCTGCCGCCAACACGAAATCAAT GACATTATTATCCGGTGCTCACGAAATAGTGTATCTTGTTCTTATCTTACTTTCTATCATGTTATATCCTATCTTCAAGATCAAACTGGTCCTATATTTA TGTAGTTTACACTTCCTAGTATCATGTTTTTTTCTGTTTAGAAATAGGGGAATCTAGTATTACCCTTCTCAATAATGCATTTTCTTGATTGTTGATGTAA ATTTGATGGATTGCTCTTCAACGTAGGAGCACAAATAATGACAAAGCTACATATGGCGTCTTCGTATCTATCAATAAAGAAAAATGCTAACAAGTAACAA CACACTCTTTGTTATTGGGTGTTATTGGATGAAGTTCATGTGGGATCCACTCAAT
• Tissue: pods
• Gene name: LI_gene_159733;
• Additional information: details;

Expression of Ll_transcript_303235

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0.1
• PS2: 0.4
• PS3: 0.7
• PW1: 0.4
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_303235

• Blastp: Sporulation protein RMD1 from Saccharomyces with 23.12% of identity
• Blastx: Sporulation protein RMD1 from Saccharomyces with 23.76% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YDL001W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429716.1)
• Pfam: Uncharacterised ACR, YagE family COG1723 (PF02582.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;