| Id Trinity | TRINITY_DN48282_c4_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_303219 |
| Sequence | TGAATGACAAATTCTTATGAAAGATGGTAAGTTAATAACGAATTAAACCAATCAATTTAAAAGTAAATTTGTGTCCATTCACAAATCAAACAAAAAGAGT AAAAAAATATTGACTTAAGGTTGAGGACAAGAACAAGTACCAAATAACATGAAAAAGCAATAGAAACAGCAATCTTTAGAATCAGAAAGATCCTCTTCCT CTTCCTCTCTCTCTCTCAGTAGTGAATGGGTGGAAGATGGAGAACCGTTTCTCATCTTTTCAACCGCGTTGTTTCTTCACAATCCAACTTTCTTCTTCAC AACCGTTTTCTCAGTGCAGCACATTGCCATGTTGACCCGGACTCATATAACGGGCTTGGAGCCCCGGAACAAGACCCTACTGTTAAAATCCCTGTTAAAG CCTACTTCATTTCCACTAGTATAAATTTGAAGGGCATTCAGGCTGACAATCTGAGAAACATTGTTCCGCCATCTTCCCGCTCTTCATTAAACTATGTTGC CCTTCGGTTCTCTGAACATAATTCGGACACTAATGACTCAAGCATTGGAAGGAAAATAATACTCCCTGGTTAAAAGCAGGACTCTTGTGTTACATGATCC TGGATTTCATGTGAAAGCAAGCAGCTGCCGTTACATGGTTGTATACCAGTATGGGTCTGCTGTCTTGTTTAATATCGAGGATCATGAAGTAGACCATTAC CTGGAACTAGTTAAGAGGCATGCATCTGTTTTACTTCCAGAGATGACAAAAGATGATTATGCAGTAAAGGAGAAGCCACAGTTAGTTGAGGACATGCAAG GAGGTCCGGACTACATAGTTCTCAAATCTTTGGACACTGATGGTATCCGTATAATTGGAAGTGTGTTGGGACAAAGCATAGCTCTGGATTATTTTGTCTC ACAGGTTGATCGTTTAGTAGAGGAGTTTGCAGGCATAAATCGTGGAATGGAAAAAACTGGAACTTTCACTATGGATAAAAAGAAGCTCCTTCAACTTGTT GGAAAGGCTAATTCACATTTGGCTGATGTGATTCTTAAAGTCGGTCTATTTGAGAGATCAGAAATTGCATGGAGGGATGCAAAATATGCCCAAATATATG AGTATCTTCAGGAGGAGTATGAAGTTGCCCAACGCTTTGGAAACCTAGATTTCAAATTAAAATTCGTAGAGCACAATATTCATTTTCTCCAAGAAGTTCT CCAGAACAGGAAGTCAGATTTCTTGGAATGGTGCATTATTTGCCTATTGTCTATTGAAAATGTTATATCCTTCTATGAGATTCTTCACCAATCAAATACA ATTTCTTAGTAAGAGCTAAGAGAGGTTGAATCTAGATTAATTTATTCTAGCAACAATTCATCCAATTTTTGAGGTAATCAAATTTTTGCACTATGTATTT ATGATAAATAAAAACCACACATCCCTGCCCGCGCTTTATTCATTGAGCTGCATGAAATTTACTGGATAATTTCATACTTAGTTTCTAAGAATAGCTAGAT ATATTGATCATAAGAGTATGGAAAAAGATTTCACCTTCCTTTCGGGAAGAGAGGATTATGAAAATCCTATTGATTATAATTTTCTCCCGGGGTATCAACT ATGAGCTCGTTTGGTTGACGGATAAGAAAGACATGATGAGACAATTTTGTCTTGTTGCAATCCAGAGTTTGGTGATCCTGCTGTTGGCATATCATATTTT GTTCACTTATTGTTTTTCTATCTCACGGGGATATGATACTGTAATTTTCCCGTTATATCTTCACGCTTCAACACCACTGTCACCACCACTGCACTATCGC TGCCGCCAACACGAAATCAATGACATTATTATCCGGTGCTCACGAAATAGTGTATCTTGTTCTTATCTTACTTTCTATCATGTTATATCCTATCTTCAAG ATCAAACTGGTCCTATATTTATGTAGTTTACACTTCCTAGTATCATGTTTTTTTCTGTTTAGAAATAGGGGAATCTAGTATTACCCTTCTCAATAATGCA TTTTCTTGATTGTTGATGTAAATTTGATGGATTGCTCTTCAACGTAGGAGCACAAATAATGACAAAGCTACATATGGCGTCTTCGTATCTATCAATAAAG AAAAATGCTAACAAGTAACAACACACTCTTTGTTATTGGGTGTTATTGGATGAAGTTCATGTGGGATCCACTCAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_159733; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_303219
| Blastp | Sporulation protein RMD1 from Saccharomyces with 21.83% of identity |
|---|---|
| Blastx | Sporulation protein RMD1 from Saccharomyces with 21.83% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YDL001W) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429716.1) |
| Pfam | Uncharacterised ACR, YagE family COG1723 (PF02582.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |