Id Trinity | TRINITY_DN48284_c2_g1_i6 |
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Name Transcript | Ll_transcript_303194 |
Sequence | AATGAATAACTTCATATAGAACTCCTATATTAAAGAGAGAGAGAGAGGGCTCACAGCAGAACAAGTCTTTCTCTACTGCCGACTCATTCTTCTCTCCTCT CAACATGTCTGGCTATCCCAACCAACCTCCTAGCTATGGCTACGGCGCCCCACCACCACCCCAAACCTATGGCGCCCCTCCTCCATCCCAATCCTACGGC GCCCCTCCTCCTTCCCAATCCTACGGCGCACCACCACCATCCGCTCAGCCATACTCCGCCAGCTCCTACGGTGGTCCCCCTCCACCTTCCGCTCCTTACG CATCCTCCCCTTACTCCTCATCCTCAGGTGGCCCCACCAAACCCCCAAAAGATCAATCATACTCCTACGGCGCTGGCGGTGGTTCCTATCCCCCAGCGCC GGCATACGCCAGTCCTTTCGCGGCGCTGGTGCCGTCGGCGTTCCCTCCGGGAACCGATCCGAACGTGATCGCTTGCTTTCAGATGGCGGACGCTGATGGC AGTGGGTTGATCGATGATAAGGAAATGCAGAGAGCGCTGTCTTCTTATAATCAGAGCTTCAGCTTGAGAACTGTTCATCTTCTCATGTATCACTTCACCA ACACCAATATCAACAAAATTGGACCCAAGGAATTCACATCTCTATTTTACAGTCTTCAGAACTGGAGGGGCATTTTTGAGAGATTTGATAAGGATAGGAG TGGCAAAATCGACTCGACTGAGTTGCGAGATGCTCTTCTGAGTTTGGGTTATGCTGTTTCTCCTTTGGTGTTGGATTTGCTCGTCTCCAAGTTTGACAAA ACTGGCGGAAAAAGCAGAGCTATAGAATATGACAATTTCATCGAGTATGGCTTTCGGACAAATTTCTTTTTCTTTTATTGCATATAACTTTCATTATATT ATGAAAAGGGTTCTGCACTTGGTGTTATTCTTCTCTTGCAGGTAAATGCCATCCTTAATGAGTAGGAATGGCAACGGGTGGGGTTGGCTTTGTGCTTACC TAACCTCGAACCCAAAATTTAAAAACCGAATACGAATCCGAACCTGAATTCGACGGGGTTAAAATTAACACTGAAATCCCCAAACCCGTCGAGTTTCGAG TAACCCAAACCCGGTGGGGAACCTAAAAATATTACTCAATTTATGCAATCCTATCAATTTAAATTTAAATTTTGAAATATTCTAATGCTACTATTCAATG CTGCTATTAAATGATATTAATTTTCAAACACAATGTTGCTATTAAATTATTAATTTATTGAATTTATTAATTGGGATGAGTTCAAGGTAGGTACTACATG TACTAAACCTGAACCCAAAAATTAACGGGTAAACCCGAACCCAATGAAAACGGGTTTAACCCGTTAAATTTGGCTTGAGTTCGAGTTGGTATCCACGAGT TCGATTTTCATTGTCATCTCTAGTAATGAATCCTAAAATATAAGGATTGCATCCAAACCTCAACTTTAAATCCTTACTAAATACATAATTTTCTAATACA AATTTTTATCTTAACGTTTCCCTTTTCTAAAATAGACACATACATATATGTGTATTAATATATATATATATATATATTTATATATGTATTAATATATGTG TCTGTTTTCAGATTTAAATAAAGGGGTGAAACTCAAACTCAACAAAATTGACTTCTTTTCTTTAGTCTACCTGCATTATGTGCACCTAATTTTTATATTG AAGTGAAATGTTGTTTTAAACTGATTCTCTTTCCTTGTTTGCTAATGCAGGTGTTGTCTTACTGTTAAGGTAAGTTACAAAATCACTGAGTTACGATTTT ATCAGTTTCTTCAATTAAAATTACATCTTATCTGTTACCTTCTATAAGACTGTATCATACTAGGATGATTAAGAGAGCAACATACTCATTTTCGTGTAAT TTCTTGAGTTATTTAGATGATGCATGTAACGTAATCAACCAAGTTTTATTCCTTTATTAAGGACCATAGTTTTTTCTACTTTATGGTCTGATTGCGAGTT AGGTTTTGGAGGGGAGGAAAAGCAAGAGAAGGTTTTAGAACTGTCTCATAAGTATATTTCATGGCTCTCAAGCCTTCCATTTTCATTGCCCCTTTCCAAA ACTAAACTCGCAAACGGTGAAACGGGTTATGTTGAAATGAAGGTAATAAGCTTCTGTTTTCCTTATGGGAAGGTAAAAGATCTCTGACTTTAAATGTGTA TTGCAGGGACTGACTGATAAATTCAAGGAGAAGGATAGTGGCTATACTGGCTCTGCAACATTCTCATATGAGTCGTTTATGCTGACTGTTCTGCCATTTC TTGTAGCTTAGGGAAATAATGGTGGGTTGTGATCAGTTTACTTTGTAATTGGCCTGGCTGAATTTGAAACTGCGTGTAGTCTAATAAGTGTATTTGCCAG TTTTTAAAGATATGCTGCTATTCTATGCTGTTTACTTAAACAAACCGTGTGGTTAATGTGATGGTTGTCATTGCAATGTGAATTATGGGTGTTGTATGAG TTTTTTTTTTTCTGATTAAAAAATATCTTTTAATTTAATGTGGTCTGTTTATTGTAATTATGGTTTGATGTGGTTGGATTATGAACTCAATGAAAATGGG TTTCCGTGATAGTGATGTTCGTCT BLAST |
Tissue | pods |
Gene name | LI_gene_159762; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_303194
Blastp | Probable calcium-binding protein CML49 from Arabidopsis with 59.77% of identity |
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Blastx | Probable calcium-binding protein CML49 from Arabidopsis with 81.12% of identity |
Eggnog | grancalcin, EF-hand calcium binding protein(ENOG410YKQK) |
Kegg | Link to kegg annotations (AT3G10300) |
CantataDB | Link to cantataDB annotations (CNT0002570) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442952.1) |
Pfam | EF hand (PF13202.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |