Ll_transcript_303023

• Id Trinity: TRINITY_DN48291_c0_g1_i12
• Name Transcript: Ll_transcript_303023
• Sequence: GTTGAGTTCAGACCATTTTCTCATCTGACATTCCTATTCGGATTTTCATTCTCAAAACCCACCAAACTAAGACAATTACTCTCTTTCCTTTTTCTCATTT TCTTCTTCTGAATCAGTAGCGGGTGCCATTTTAGAAGTAAAAGCAAGTTCTGAATTGGTACTTCCTCTCTCATAAAGGAGTTTCATTTAAGCTCCATAAG CTGGATTCTGAGGTGCCCATCACAAAATGGCAAAGCGTGGATACAAAATACAGGAATTTGTGGCTCATTCAGGAACTGTTAATTGTTTGAATCTCGGAAA GAAGGAGTGCCGCCGTTTCATTACAGGAGGAGATGATCACAAGGTCAATTTATGGACTATTGGCAAACCAACTTCTTTAATGAGCCTATCAGGTCATAAT AGTCCAGTCCAATCCTTGGCTTTTGACTCAGCAGAAGTATTAGTTCTTGGTGGAGCATCATCGGGTGTGATAAAGCTTTGGGATTTGGAAGAAGCAAAGT TGGTTCGCACTGTTGCTGGACAAAGATCCAGTTGTACTGCTATTGAATTTCATCCATTTGGTGAGTTTTTTGCATCTGGCTACACGGATGCTAATCTTAA GATTTGGGATATCCGTAAAAAAGGATGCATTCATACATACAAGGGTCACAGCCAGGGCATCAACACTATCAAATTCACTCCAGATGGCCGTTGGGTAGTT TCCGGTGGACTTGATAATGTCGTGAAGGTGTGGGATCTAACCGCTGGAAAGCTCTTGCATGACTTCAAGTTCCATGAAGGGCACATTACGTCCATAGATT TTCATCCTCTAGAGTTTCTTCTAGCTACAGGTTCAGCAGACAGAACAGTGAAATTTTGGGATTTAGAAACTTTTGAAATGATTGGATCTGCCAGACGCGA GGTTTCAGGGGTACGCTCAATAGCTTTTCATCCCGATGGTAGGACCCTGTTTACTGGACTTGAGGATGGTTTGAAGGTCTATTCATGGGAACCTGTCATA TGTCATGATACTGTTGATATGGGATGGACAACACTTGGTGATCTCTGTATTCATGATGGAAAACTTTTAGGGTGCTCATACTTTCGAAATTCTGTTGGAG TCTGGGTTGCAGATATATCGCTTATTGAGCCATATGCTGATGGTTTTGATCCTAAGAAGAAAAGTGAAGGTACAGAGCAGAAACTTAGTCTTCATGGAAG TGAACTTGACAAAGTAGAAGTTGATGTGGGACCGACTTCTGGGTTCCGCAATATGTCTCCCGATGAGTCAAAGGAGATAAAAAATATATACATCGACTGT TCTGGAGGGAAACCTGTTGCTTTACAGAAATCTTCATCTTTTAATTCTTCAAAAGTAGATCTCCCAGAGGAATCTGTGGATATTTCTAAATCGGGAGCAT TGAAGCAGAGTCCTGCAACTGGAGTTCATGTAAAATCTATTGAACAAGTGCAAAGAAAATCTCCAGTTGTGCAAAACATTGAATCTCGAAACATTCCTGA TGGTAAGGACACAGAAAATTCTGGAAAGGAGACCATCACCTTTTCAAAGACTAGGCCTGGAATGCTACTTAAACCAGCTCATGCAAAAAGAGCATCCACT CACATATTTGATGTTGATAAGTATTCAGAAGATGTAAATTCTGAAACTTTTTGTGATACTGCAAGAAAACTCGACAGTACAAAAGATTCTGAGTTCCAAG TGAATCTAGGATCACTGAATGAAGTAACAGAATCTTGTGAAGATAAATATCCTACCAAGACTGTCACAGACAAGTTGGACGAGACTATATCTCTGCAGAG ATTATCCGACCAAGCAAAACGTGATGAGTCTTCTTTTTGCAATGAAGAGATCAATCCGGTCAAATATGTCAATGGAGTTGCTGTTGTACGAGGAAGGACT CGCTCTCTAGTGGAGAGGTTTGAAAGAAGGGAAAAAGTTCAAATCGATGAAGATCAAACTAATTCTACTCTCCCCGCAATAAATGAAGAGAGGGAAAAAG TTCACAATGAAGACCAAGTTAATGTATCCTCCACTGGGGTATTTGAGAGGAGGGAAAAAATTCCCCGCAATGAAGATCAAAACAATATGCCTTCCATTCC CAACACAATATCTGAAACCTCCACCCTGGCATTTGAGAGGAGGGAAAGAATTCCCCGCGATGAAGATCGAAACAAAATTTCGAGGGAAAGAACTCCTCCT AATGATGATCGTAACAATATGCCCTCCATTACAAGCACAATATCTGAAACCTCCACCATGGCATTTGAGAGGAGGGGGAAAATTCCCGTCAATGAAGATC GTAACAACATGCCAATGGAAAGAATTTCCCGTAATGAAGATCAAAACAATATGCCCTCCATTGCCAACACAGTATCTGAAACCTCCAGCACTGTATTTCG GAGGAGAGAAAGAATTCCCCGCAATGTAGATCAAAACAATATGCCCTCCATTGCCAACACAGTATCTGAAACCTCCAGCATGGTATTTCGGAGGAGAGAA AGAATTCTCCGCAATGAAGATCGAAACAATATTCCCCATATTCCCGGCACAATATCTGAATCGGATAAGTCTCCCTCCAAAGTGAAAGTTGAGCCTCGAA TTCCTAGAGGGGATTTAGATTCTGCAAATGAAGGGCAAATAATTGAAGCACTGATGCAAACTCATGATGTAACATTAAGTACTCTTCGTTCACGCATTAC AAAGTTACAGGTGGTGCGGCATTTTTGGGAGCGCAGTGATATTAAAGGCGCCATTAAGGCTTTGAGAAAGCTACCAGATCATTCTGT
• Tissue: pods
• Gene name: LI_gene_159812;
• Additional information: details;

Expression of Ll_transcript_303023

FPKM

• PAB: 1.6
• PNAB: 4.5
• PS1: 5.4
• PS2: 5.5
• PS3: 5.8
• PW1: 2.9
• PW2: 8.9
• PW3: 12.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_303023

• Blastp: Katanin p80 WD40 repeat-containing subunit B1 homolog from Arabidopsis with 65.22% of identity
• Blastx: Katanin p80 WD40 repeat-containing subunit B1 homolog from Arabidopsis with 65.22% of identity
• Eggnog: Katanin p80 (WD repeat containing) subunit B 1(ENOG410XQAC)
• Kegg: Link to kegg annotations (AT5G23430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418885.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;