Ll_transcript_304047

• Id Trinity: TRINITY_DN48295_c1_g1_i5
• Name Transcript: Ll_transcript_304047
• Sequence: AAAGATTCCAACTACCTTGCTTTTGTGGAGACCGTACATGGTGTTCATTGGTGTTGCTTGAAAGATGGTCAGATTAAAATCAATGTGGATGCTAGTTGTA TGAAAGGATAAAATGTTATGGTAGGAGATAGTGTTGCTCGAGACCATACTGACCAATGACTGTCAGGATTTTCAGCCAATTTTGGCGTTGGTTCCCCTCT CTTAGCTGAGCTTTTGGCTATGGAGCAGAGCTTAATGTTTGCTTTGAACTTGGGTTTTAAGAAGATTAGTTTGGAGTGTGATTATCTTGAAGTTGTTCAC CTTATTTCTGAAAGGTCTGAAATTCGTCTTAATGGTATTTTGAGAGTAGTCTTTAATGTCCGCACTTGGATCTCCCACGATTGGACGTGGAGGTTAAGTT TATTGTTAGAGATGCCAATATTGTGGCTGATTTCATGGAAGACTAGGCTCCCACTCATCAGCAACTCTCCAAATTTGGAAATTTGGGCTGAAACCCCTCC AGACTGTCAACCGCATCTTGATTTAGATAGTTCTCCTCTTTGTTAGTTTCTCTTTTTGTTTTTCCTATAATTGATCTCCCGCGATTGGATGTTGAGGTTA AGTTTGATGTTAAAGATGCCAATGTTGTGGCTGATTTCATGGCAAGACTAGGCTCCCACTCATCAGCAACTCTCCAAATTTGGGCTGAGCAGACTGTCAA CTGCATCTTAATTTAGATCGTTTTCCTCTTTGTTAGTTTCTCTTTTTGTTTTTTCCTATAATTCCGATTACCAAAAAAAACTTACTTTTCATTATCTCAC ATTAGTGGTATATACTCTATGGAGTAGGGACTATTGGGGTAAAATTGGAATATTATTTGGCTGTTAAATGTAAAACCTAGTAATTATTTTGGGTGCACAA TGGTAGTAATTTGAATAACATGAAACTAGAGGAAATTAATCAAGCACCTGCGGGCCTAAGTGCTCTTCATTAGTTCCCTTAATTATCTAAGTAGTTTAAA ACACATTTTTTATTCTTTAAATGTGTAATAATTTTTGCAATAACATATTTTATATATTTTTTTACTATTTTATACATGTATCCTGATTATATTTTCAAAA AAATGCGTATCCACATATGGAATAAGTACCATATCCGACATATGTCTCCGTATCCGTGATTCACATCACACACCATACACTGTGAAAAAAAGAGAGAAGC TGAAGTTGAAGATGGTTGCAACTTCTTTGTGTTCATCAACCCTTCAATCCCAATTCAATGTACTCAACAACCACCTTCTCAAAATTTCTCCTTTCCAACC CCAAAATCTCACATTCTCCAGGAGCAGGATCTCAACCATGGTGAAGGCTTCATCTCGTGTCGACAAGTTTTCAAAGAGCGATATCATTGTTTCTCCATCT ATTCTTTCTGCCAACTTTTCAAAATTAGGAGAGCAGGTTCAATATATTATATTCTCTATTCATGCTTTCTAATTGTCAACAATCATGATTGTTGGAGTTT GTCTAATAATGTGCAGGTGAAAGCAGTGGAGTTGGCAGGTTGTGATTGGATTCATGTTGATGTAATGGATGGTCGCTTTGTTCCAAATATTACAATCGGG CCTCTTGTGGTTGATGCATTGCGACCTGTGACAGATCTTCCTTTGGATGTGCACCTGATGATTGTAGAACCTGAACAGCGGGTGCCAGATTTTATCAAGG CAGGGGCTGACATAATCAGTGTTCATGCTGAGCAATCTTCCACCATCCATTTGCATCGTACAGTTAATCAAGTGAAAAGCCTGGGAGCTAAAGCTGGAGT TGTCCTAAACCCTGGTACCCCCCTCAGTGCAATAGAATATGTCCTTGATGGTGAGCCCTTTCTCTCCCCATTCCTCTTATATTTTTATCCTCCATTTTTT TCATTATATAATCAGAACATCAATGATATTATTTATGATTGTGGTTCCACACTTGCTTCATATGATTTAGTAAAGCATTAGCGATGGACCAATACCAGCC TTGACTATGGACTTGGTTTAGAACAATAATAAGTGGTTGATTTGGTTTTAATTATGTCTGTAAACCCTGGCTTTGGTGGCCAGAGTTTTAT
• Tissue: pods
• Gene name: LI_gene_159840;
• Additional information: details;

Expression of Ll_transcript_304047

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304047

• Blastp: Ribulose-phosphate 3-epimerase, chloroplastic from Solanum with 91.58% of identity
• Blastx: Ribulose-phosphate 3-epimerase, chloroplastic from Spinacia with 94.64% of identity
• Eggnog: ribulose-phosphate 3-epimerase activity(COG0036)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438542.1)
• Pfam: Ribulose-phosphate 3 epimerase family (PF00834.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;