| Id Trinity | TRINITY_DN48295_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_304049 |
| Sequence | AAAGATTCCAACTACCTTGCTTTTGTGGAGACCGTACATGGTGTTCATTGGTGTTGCTTGAAAGATGGTCAGATTAAAATCAATGTGGATGCTAGTTGTA TGAAAGGATAAAATGTTATGGTAGGAGATAGTGTTGCTCGAGACCATACTGACCAATGACTGTCAGGATTTTCAGCCAATTTTGGCGTTGGTTCCCCTCT CTTAGCTGAGCTTTTGGCTATGGAGCAGAGCTTAATGTTTGCTTTGAACTTGGGTTTTAAGAAGATTAGTTTGGAGTGTGATTATCTTGAAGTTGTTCAC CTTATTTCTGAAAGGTCTGAAATTCGTCTTAATGGTATTTTGAGAGTAGTCTTTAATGTCCGCACTTGGATCTCCCACGATTGGACGTGGAGGTTAAGTT TATTGTTAGAGATGCCAATATTGTGGCTGATTTCATGGAAGACTAGGCTCCCACTCATCAGCAACTCTCCAAATTTGGAAATTTGGGCTGAAACCCCTCC AGACTGTCAACCGCATCTTGATTTAGATAGTTCTCCTCTTTGTTAGTTTCTCTTTTTGTTTTTCCTATAATTGATCTCCCGCGATTGGATGTTGAGGTTA AGTTTGATGTTAAAGATGCCAATGTTGTGGCTGATTTCATGGCAAGACTAGGCTCCCACTCATCAGCAACTCTCCAAATTTGGGCTGAGCAGACTGTCAA CTGCATCTTAATTTAGATCGTTTTCCTCTTTGTTAGTTTCTCTTTTTGTTTTTTCCTATAATTCCGATTACCAAAAAAAACTTACTTTTCATTATCTCAC ATTAGTGGTATATACTCTATGGAGTAGGGACTATTGGGGTAAAATTGGAATATTATTTGGCTGTTAAATGTAAAACCTAGTAATTATTTTGGGTGCACAA TGGTAGTAATTTGAATAACATGAAACTAGAGGAAATTAATCAAGCACCTGCGGGCCTAAGTGCTCTTCATTAGTTCCCTTAATTATCTAAGTAGTTTAAA ACACATTTTTTATTCTTTAAATGTGTAATAATTTTTGCAATAACATATTTTATATATTTTTTTACTATTTTATACATGTATCCTGATTATATTTTCAAAA AAATGCGTATCCACATATGGAATAAGTACCATATCCGACATATGTCTCCGTATCCGTGATTCACATCACACACCATACACTGTGAAAAAAAGAGAGAAGC TGAAGTTGAAGATGGTTGCAACTTCTTTGTGTTCATCAACCCTTCAATCCCAATTCAATGTACTCAACAACCACCTTCTCAAAATTTCTCCTTTCCAACC CCAAAATCTCACATTCTCCAGGAGCAGGATCTCAACCATGGTGAAGGCTTCATCTCGTGTCGACAAGTTTTCAAAGAGCGATATCATTGTTTCTCCATCT ATTCTTTCTGCCAACTTTTCAAAATTAGGAGAGCAGGTGAAAGCAGTGGAGTTGGCAGGTTGTGATTGGATTCATGTTGATGTAATGGATGGTCGCTTTG TCCCGAACATTACAATTGGGCCTCTTGTGGTTGATGCATTGCGACCTGTGACAGATCTTCCTTTGGATGTGCACCTGATGATTGTAGAACCTGAACAGCG GGTGCCAGATTTTATCAAGGCAGGGGCTGACATAATCAGTGTTCATGCTGAGCAATCTTCCACCATCCATTTGCATCGTACAGTTAATCAAGTAAGGTTT CCCTCGTGATCTATCATCTAACACTTGACCAGTTAAATAAAATTGATACTAAGGGGGTTAACTGATTAGCACTATTTTTGGTAACATTAGAGGTGCCAAA CATATATTTACCCCACTATATATATTGCTATCACATGCAATTTCAGAATTTTGTTATCGAGGACAGAGTAAATCTCCATATTGATGCATGAGATGAAAGT CTATGGTTTAATGTTGAAAAAATGTCTTGGCTACTAACTTTATTACATGAACATCAATAAAAGCATTGTTGAAGGGTGGCTCATTTTAATTTTTCATGGT ATTTAAGATACCAACTTGCCTGGCTAAACTATTTTCTTAAAGTTGGCATTGTTGAAGGCCAAAGCACTCTTTTACAGGGATCCAGGAAAGTGTTTATAGT TCTTCTATATGTTATGTAAATGAAATCTCTGAGGCCTTAGAAAGAACATATAGTTTTCTAAAACTTTGTTTTACAAATGGAGTTTTTTTTGTTGCTGTTA CATGGTCTCACAATATTATTATTGGGATGGACATGCGATGGTAATTTTATTTCACATCTCTCTTTTTATCCTTTTTTTGTTTGTTTTGGGTTAGTAATCA CCTATTATTTGGGTTATGCTAAAATCCAGTAGAAGGAATTGGTCTTGTTATAAAGGTAGCTAAAGCTATATGAAGTTGCCTACCTTATTCTTGACGAGGT AATGCTTTGCCTCTTCATGTTAATTAAGTGTCTAAATAAATAATAGGACTTCAGCAGCCTCATTCCATCCCACAAGATTTCCTTCACCTAAAGTTTTGTT TACACCATAGCATGATATTTTAAGCCTTATTTACTGAGTAAATCTGTTTTAGAGTTTGATTCTTTTCTCGGAACTATGGGCTGTCATATGCTGTTGTGGG CAAAAATGTATAGAAGCAGACATCTAAGGCACTGGATACTAACAATTATTACTTCAAGGCCTACATTTTACTCCTGTTTCACTTTTCCGGTTTATATCTT TATCTGACCCACAAAATCTCATAATTTAGGTGAAAAGCCTGGGAGCTAAAGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_159840; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_304049
| Blastp | Ribulose-phosphate 3-epimerase, chloroplastic from Spinacia with 80.12% of identity |
|---|---|
| Blastx | Ribulose-phosphate 3-epimerase, chloroplastic from Spinacia with 80.12% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438542.1) |
| Pfam | Ribulose-phosphate 3 epimerase family (PF00834.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |