Ll_transcript_438747

• Id Trinity: TRINITY_DN48301_c1_g1_i2
• Name Transcript: Ll_transcript_438747
• Sequence: GGGAGATATTTCACACCAAAAAAGGAGATGACTTGTTATCTACAAGATAAAAAAATTGAAACGAAAGAAGGGTCAAAATCCAAGTAAGTCTAAGTCTAAC TCGGGTGTGGTGCTGGGCTCACACAAGACGAAGACGAAAGAAGAGTAAGGTTCGTTGGATTAGCGTGTTTGTGTGAGTGGTTCACGTACTCTCTAACCTC TCCTTCTTCTCCTTTTTATCTTCATTCTCACTCACTCATTATCTATTCTCCACAAACACAAACTTCTTCTCCTCTCTCTCTCTCTCTCCTTCTCTCTCTG TGCGATGGCACTGTATTCGGTGTCTTCTCTTTCTCAGCTTCTTCGCGCCAATGCTCTCTCTCCGTCGCAACCGTTTCCGATGATTCTTAACGGTCACTTG ATCGTTGACTTCGCTGGTCACTCTTCCAAACCAAAACGACGCAACCGGAGACTCTCCTCTTCGCCGCCGCCGCCGCCGTTTCATTCTCCGAGGTCACGAT TCCGTCGTTCATCGCTCAAAGCTGTTCTCGAACTTAACCGATGCAGCAGCAACATCAACGCTTCTGATGCTTCATCTGATTTAAAGCCAAAGGTTGCGAA CTTGGAGGACATACTATCAGAAAGAGGAGCCTGTGGTGTTGGATTCATTGCCAATTTGGAAAATAAAGCATCCCATGAGATTGTCAAGGATGCTCTAAAT GCTTTAAGCTGTATGGAACATCGTGGAGGCTGTGGAGCTGATAATGACTCTGGTGATGGTTCAGGGCTAATGACTGCAATTCCATGGGATCTATTTGACA ATTGGGCCAGCAAGCAAGGGATTGCTTCCTTTGATAAGTTACACACTGGTGTTGGAATGGTTTTCCTACCCAAAGATGTTGAACTTCTGAATGAGGCTAA GAAAGTTGTTGTAAATATCTTTCGGCAAGAAGGTCTTGAGGTGCTTGGGTGGAGGCCTGTCCCTGTAAATGCTCCTGTAGTAGGTTATAATGCGAAGGAG ACCATGCCCAACATACAGCAGGTATTTGTTAAGATCTTGAAAGAAGAAAATGTCGATGACATCGAGCGAGAATTGTACATCTGTCGGAAATTAATTGAAA AAGCAGTAACCTCAGAAAGTTGGGGAAATGAGCTTTATTTCTGTTCTTTATCTAATCAAACCATAGTTTACAAGGGGATGCTTCGCTCAGAAGTTCTTGG GTTATTTTATTCTGACCTTCAAAATGATCTCTATAAGTCCCCTTTTGCCATTTATCATCGAAGATATAGCACAAATACTAGTCCCAGGTGGCCTCTTGCA CAGCCAATGAGACTTCTTGGCCATAATGGAGAAATCAACACTATACAGGGGAACTTGAATTGGATGCAATCACGAGAGCCATCATTGAAGTCTCCTGTAT GGCGGAATCGTGAAAATGAAATTCGTCCATATGGAAATCCAAAGGCATCAGACTCGGCAAACCTTGATAGTGCTGCAGAATTATTGATAAGAAGTGGTCG TAATCCTGAGGAAGCTATGATGATTCTTGTTCCAGAGGCTTACAATAATCACCCAACTCTGACAAACAGCTACCCCGAGGTGGTTGACTTCTATGACTAC TACAAGGGTCAGATGGAGGCTTGGGATGGACCAGCATTGCTGTTATTCAGTGATGGAAAAACTCTCGGTGCATGTCTTGATCGGAATGGACTGAGACCTG CTAGGTACTGGCGTACATCAGACAATATGGTCTATGTTGCCTCTGAGGTTGGTGTTGTGCCAGTGGATGACTCGAAGGTTATCTCAAAAGGCCGATTAGG TCCAGGCATGATGATTACTGTTGATTTACTTGGTGGTCAGGTGTATGAGAATACAGAGGTTAAAAAGCGAGTAGCCTTATCAAATCCATATGGGAACTGG ATCAAGGAAAATCTGCGGTCTTTGAAACCTGCGAACTTTCTTTCAGCAGCTGTGATGGAAAACGATGCAGTATTAAGACACCAACAGGCATTTGGGTACT CTAGTGAAGATGTCCAGATGGTGATTGAGAGTATGGCTGCTCAAGGAAAGGAGCCCACATTTTGCATGGGAGATGATATTCCACTGGCAGCGTTGTCTCA GAAGCCTCACATGCTTTTCGATTATTTTAAGCAACGCTTTGCACAGGTTACAAACCCTGCTATTGATCCTCTTCGTGAAGGATTGGTTATGTCTCTTGAA GTCAACATTGGGAAACGGGGGAATATATTGGAAGTTGGACCAGAGAATGCTTCACAGGTTATATTGTCTAGTCCAGTATTGAATGAAGGGGATCTTGAGT CATTACTAAAGGACACACACTTAAACCCACAAGTATTGCCTACATTTTTTGATATATCTAAGGGGGTTGATGGTTCCTTGGAAAAAGCATTAAGTAAGCT TTGTGAAGCTGCAGATGAAGCTGTTAGAAATGGTTCCCAGTTGCTTGTTCTTTCAGACCGTTCAGATGAACTGCAACCAACACATCCTGCAATTCCTATA CTTCTTGCTGTTGGTACTGTTCATCAGCATCTAATTGAGAATGGCCTGAGGACGTCAGCTTCAATTTTAGCTGATACTGCTCATTGCTTTAGCACTCATC AGTTTGCATGTTTGATAGGATATGGTGCAAGTGCTGTTTGTCCATACTTGGCATTGGAGACATGCCGGCAGTGGCGATTGAGTAACAAAACTGTAAATCT GATGAGGAATGGAAAGATGCCTACTGTATCAATTGAGCAAGCACAGAAAAACTATTCCAAGGCTGTAAAAGCAGGTCTTCTTAAAATTCTTTCCAAAATG GGCATCTCATTACTTTCAAGTTACTGTGGTGCACAGATATTTGAAGTTTATGGGTTGGGGAAGGAAGTTGTCGATGTTGCATTCAGAGGAAGTGTGTCAA AAATTGGTGGATTAACTTTTGATGAGCTGGCAAGAGAGACCCTGTCTTTCTGGGTGAAAGCATTCAGTGAAGATACTGCTAAAAGATTGGAAAATTTTGG ATTTATACAGTTCAGACCTGGGGGGGAGTATCATGCAAATAATCCTGAGCTGTCAAAGTTGCTCCATAAAGCTGTTCGTCAAAAAAGTCAAAGTGCCTTT TCAGTTTATCAGCAGCATTTGGCTAACCGACCTGTTAATGTTCTTCGTGATCTTGTTGAGTTTAAAAGTGATCGTTCTCCAATACCTGTGGGGAAGGTTG AACCTGCTTCATCTATTGTTCAAAGGTTTTGCACTGGCGGGATGTCACTTGGAGCTATTTCGAGAGAAACTCATGAAGCAATTGCAATTGCAATGAACAG ATTAGGTGGAAAATCAAATTCAGGGGAAGGTGGTGAGGATCCTATTCGCTGGAAACCACTTTCAGATGTTGTTGATGGTTACTCTCCAACTCTTCCTCAT CTTAAAGGTCTTCAAAATGGGGATACTGCTACCAGTGCTATCAAGCAGGTTGCTTCTGGAAGGTTTGGTGTCACCCCAACATTCTTGGCAAATGCTGATC AAATTGAAATAAAAATTGCACAAGGTGCAAAGCCTGGTGAAGGTGGACAATTGCCTGGGAAAAAAGTTAGCATGTATATTGCACGGTTGAGAAATTCTAA GCCTGGGGTTCCTCTTATATCTCCACCTCCTCATCATGACATTTATTCTATTGAGGATCTTGCTCAACTGATATTTGATCTTCATCAGGTAAACCCTAGG GCCAAGGTGTCAGTAAAACTGGTTGCTGAAGCTGGAATTGGCACTATTGCATCTGGGGTTGCTAAGGGAAATGCTGACATTATACAGATTTCAGGGCATG ATGGTGGAACGGGAGCAAGCCCTATAAGTTCCATCAAGCATGCAGGAGGTCCTTGGGAACTTGGACTTACAGAATCTCACCAGACACTAATAGAAAATGG ACTTAGAGAAAGGGTCATTCTCAGAGTTGATGGTGGCTTTAAAAGTGGAGTTGATGTCATGATGGCAGCAATAATGGGTGCTGATGAATATGGGTTTGGG TCAATGGCAATGATTGCTACTGGGTGTGTTATGGCCCGCATTTGCCACACCAATAATTGCCCAGTTGGAGTTGCCAGTCAGAGGGAAGAGTTGCGTGCAC GCTTTCCTGGTGTTCCTGGAGATCTCGTCAACTTCTTTTTATATGTTGCTGAGGAGGTAAGAGGCATATTGGCACAACTGGGGTATGAGAAATTGGATGA TATAATTGGCCGGACAGACTTGTTGCGACCAAGAGACATCTCTCTACTGAAAACTCAGCACCTAGATCTAAGTTATCTCCTCAGTAATGTTGGGTTGCCT AAATGGAGTAGTTCAACAATCAGGAATCAAGAGCCTCATACCAATGGTCCTGTTCTTGATGATGTTTTGCTAGCAGATCCAGAGATTGCAGATGCCATTG AAAATGAAAAAGCGGTTAGTAAGACTACAAAAATATACAACATCGATCGTGCTGTTTGTGGGCGTATAGCTGGCGTCATTGCAAAGAAGTATGGCGACAC TGGTTTTGCTGGACAGTTGAATCTAACATTTACAGGAAGTGCTGGGCAGTCATTTGCATGCTTTTTAACACCTGGAATGAACATACGACTTGTTGGAGAG GCTAATGACTATGTGGGCAAGGGCCTTGCTGGAGGTGAGTTGGTTGTCACTCCAGTTGAAAAGACGGGATTTCGACCCGAGGATGCAACTATTGTGGGGA ACACTTGCTTGTATGGAGCAACAGGTGGACAAGTCTTTGTTAAAGGGAAAGCTGGGGAGAGATTTGCTGTGAGAAACTCACTTGCCGAAGCTGTGGTTGA AGGCACAGGAGATCATTGTTTGGAATACATGACTGGTGGCTGTGTGGTTATCCTGGGAAAAGTGGGTAGAAATGTAGCTGCTGGAATGACTGGAGGGTTG GCTTACATTCTTGACGAGGACAATACTCTTATACCCAAGGTAAACAGAGAAATTGTAAAAATCCAACGAGTGTCAGCACCTGTGGGGCAGATACAGCTGA AGAGCCTAATTGAAGCCCATGTTGAAAAAACGGGAAGTAACAAAGGTGCAGCTATTCTGAAGGACTGGGAAGAGTACTTGCCACTATTTTGGCAGCTGGT TCCACCTAGCGAAGAAGACACTCCTGAAGCTAATCCCAAGTACGACACAACTACTGCAGAACAGGTCACTTTTCAGTCTGCTTAGGATAATAATACGAGC CTCGATTACGCCAGGCCTTGGAGCCATTGTTGTGTCCTTGCTTTGTACAGGAATTGAAGAAGGTATATGATTAGGGTGGAGATGCTAACCAAAATATGGG ATATACTAATTATCCCATGTAACCAAAGGGATGCATCCATTCTGAAGGTCGTATTTGCCATTAGTTCCAAGCAACCCTTGTACATCCCATTTGAAGCATT AGCCTTCCCTTCACTTCAAAACTTCAGTATAGGACTATAGGCATTTGAAAGAAAAACTCTAAATAAAATGCTGTTCATGTGAATCTGTTTTGAAAGTTTG TGGATGGTGAAAATAAATTACTGGATTCATATGTCTGATCATCTCTCATCTGTCTGATCAAATGAAAAATTAATGTTTTTCACATGCACTGTTGAAATAC TTTAAATAACTTGTCATGATTTTTATTTTCTTTTTTTGCGTATGTTTTATTGTTACTCCTG
• Tissue: pods
• Gene name: LI_gene_159872;
• Additional information: details;

Expression of Ll_transcript_438747

FPKM

• PAB: 30.5
• PNAB: 31.7
• PS1: 31
• PS2: 16.4
• PS3: 26.9
• PW1: 46.7
• PW2: 59.4
• PW3: 50.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_438747

• Blastp: Ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial from Arabidopsis with 82% of identity
• Blastx: Ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial from Arabidopsis with 84.25% of identity
• Eggnog: glutamate synthase(COG0067)
• Kegg: Link to kegg annotations (AT5G04140)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437056.1)
• Pfam: Glutamine amidotransferases class-II (PF00310.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;