Id Trinity | TRINITY_DN48301_c1_g1_i6 |
---|---|
Name Transcript | Ll_transcript_438752 |
Sequence | GGGAGATATTTCACACCAAAAAAGGAGATGACTTGTTATCTACAAGATAAAAAAATTGAAACGAAAGAAGGGTCAAAATCCAAGTAAGTCTAAGTCTAAC TCGGGTGTGGTGCTGGGCTCACACAAGACGAAGACGAAAGAAGAGTAAGGTTCGTTGGATTAGCGTGTTTGTGTGAGTGGTTCACGTACTCTCTAACCTC TCCTTCTTCTCCTTTTTATCTTCATTCTCACTCACTCATTATCTATTCTCCACAAACACAAACTTCTTCTCCTCTCTCTCTCTCTCTCCTTCTCTCTCTG TGCGATGGCACTGTATTCGGTGTCTTCTCTTTCTCAGCTTCTTCGCGCCAATGCTCTCTCTCCGTCGCAACCGTTTCCGATGATTCTTAACGGTCACTTG ATCGTTGACTTCGCTGGTCACTCTTCCAAACCAAAACGACGCAACCGGAGACTCTCCTCTTCGCCGCCGCCGCCGCCGTTTCATTCTCCGAGGTCACGAT TCCGTCGTTCATCGCTCAAAGCTGTTCTCGAACTTAACCGATGCAGCAGCAACATCAACGCTTCTGATGCTTCATCTGATTTAAAGCCAAAGGTTGCGAA CTTGGAGGACATACTATCAGAAAGAGGAGCCTGTGGTGTTGGATTCATTGCCAATTTGGAAAATAAAGCATCCCATGAGATTGTCAAGGATGCTCTAAAT GCTTTAAGCTGTATGGAACATCGTGGAGGCTGTGGAGCTGATAATGACTCTGGTGATGGTTCAGGGCTAATGACTGCAATTCCATGGGATCTATTTGACA ATTGGGCCAGCAAGCAAGGGATTGCTTCCTTTGATAAGTTACACACTGGTGTTGGAATGGTTTTCCTACCCAAAGATGTTGAACTTCTGAATGAGGCTAA GAAAGTTGTTGTAAATATCTTTCGGCAAGAAGGTCTTGAGGTGCTTGGGTGGAGGCCTGTCCCTGTAAATGCTCCTGTAGTAGGTTATAATGCGAAGGAG ACCATGCCCAACATACAGCAGGTATTTGTTAAGATCTTGAAAGAAGAAAATGTCGATGACATCGAGCGAGAATTGTACATCTGTCGGAAATTAATTGAAA AAGCAGTAACCTCAGAAAGTTGGGGAAATGAGCTTTATTTCTGTTCTTTATCTAATCAAACCATAGTTTACAAGGGGATGCTTCGCTCAGAAGTTCTTGG GTTATTTTATTCTGACCTTCAAAATGATCTCTATAAGTCCCCTTTTGCCATTTATCATCGAAGATATAGCACAAATACTAGTCCCAGGTGGCCTCTTGCA CAGCCAATGAGACTTCTTGGCCATAATGGAGAAATCAACACTATACAGGGGAACTTGAATTGGATGCAATCACGAGAGCCATCATTGAAGTCTCCTGTAT GGCGGAATCGTGAAAATGAAATTCGTCCATATGGAAATCCAAAGGCATCAGACTCGGCAAACCTTGATAGTGCTGCAGAATTATTGATAAGAAGTGGTCG TAATCCTGAGGAAGCTATGATGATTCTTGTTCCAGAGGCTTACAATAATCACCCAACTCTGACAAACAGCTACCCCGAGGGAGAATATCAGAAGGTGGCT GGGTGCAGAAAGGGGCACCAACACAACTACTGACTGGAATGTTGGTAATTCTTATGTCACCCGCAAAGTCATGGACAGTACGTGTCATACATGTGGTTGA CTTCTATGACTACTACAAGGGTCAGATGGAGGCTTGGGATGGACCAGCATTGCTGTTATTCAGTGATGGAAAAACTCTCGGTGCATGTCTTGATCGGAAT GGACTGAGACCTGCTAGGTACTGGCGTACATCAGACAATATGGTCTATGTTGCCTCTGAGGTTGGTGTTGTGCCAGTGGATGACTCGAAGGTTATCTCAA AAGGCCGATTAGGTCCAGGCATGATGATTACTGTTGATTTACTTGGTGGTCAGGTGTATGAGAATACAGAGGTTAAAAAGCGAGTAGCCTTATCAAATCC ATATGGGAACTGGATCAAGGAAAATCTGCGGTCTTTGAAACCTGCGAACTTTCTTTCAGCAGCTGTGATGGAAAACGATGCAGTATTAAGACACCAACAG GCATTTGGGTACTCTAGTGAAGATGTCCAGATGGTGATTGAGAGTATGGCTGCTCAAGGAAAGGAGCCCACATTTTGCATGGGAGATGATATTCCACTGG CAGCGTTGTCTCAGAAGCCTCACATGCTTTTCGATTATTTTAAGCAACGCTTTGCACAGGTTACAAACCCTGCTATTGATCCTCTTCGTGAAGGATTGGT TATGTCTCTTGAAGTCAACATTGGGAAACGGGGGAATATATTGGAAGTTGGACCAGAGAATGCTTCACAGGTTATATTGTCTAGTCCAGTATTGAATGAA GGGGATCTTGAGTCATTACTAAAGGACACACACTTAAACCCACAAGTATTGCCTACATTTTTTGATATATCTAAGGGGGTTGATGGTTCCTTGGAAAAAG CATTAAGTAAGCTTTGTGAAGCTGCAGATGAAGCTGTTAGAAATGGTTCCCAGTTGCTTGTTCTTTCAGACCGTTCAGATGAACTGCAACCAACACATCC TGCAATTCCTATACTTCTTGCTGTTGGTACTGTTCATCAGCATCTAATTGAGAATGGCCTGAGGACGTCAGCTTCAATTTTAGCTGATACTGCTCATTGC TTTAGCACTCATCAGTTTGCATGTTTGATAGGATATGGTGCAAGTGCTGTTTGTCCATACTTGGCATTGGAGACATGCCGGCAGTGGCGATTGAGTAACA AAACTGTAAATCTGATGAGGAATGGAAAGATGCCTACTGTATCAATTGAGCAAGCACAGAAAAACTATTCCAAGGCTGTAAAAGCAGGTCTTCTTAAAAT TCTTTCCAAAATGGGCATCTCATTACTTTCAAGTTACTGTGGTGCACAGATATTTGAAGTTTATGGGTTGGGGAAGGAAGTTGTCGATGTTGCATTCAGA GGAAGTGTGTCAAAAATTGGTGGATTAACTTTTGATGAGCTGGCAAGAGAGACCCTGTCTTTCTGGGTGAAAGCATTCAGTGAAGATACTGCTAAAAGAT TGGAAAATTTTGGATTTATACAGTTCAGACCTGGGGGGGAGTATCATGCAAATAATCCTGAGCTGTCAAAGTTGCTCCATAAAGCTGTTCGTCAAAAAAG TCAAAGTGCCTTTTCAGTTTATCAGCAGCATTTGGCTAACCGACCTGTTAATGTTCTTCGTGATCTTGTTGAGTTTAAAAGTGATCGTTCTCCAATACCT GTGGGGAAGGTTGAACCTGCTTCATCTATTGTTCAAAGGTTTTGCACTGGCGGGATGTCACTTGGAGCTATTTCGAGAGAAACTCATGAAGCAATTGCAA TTGCAATGAACAGATTAGGTGGAAAATCAAATTCAGGGGAAGGTGGTGAGGATCCTATTCGCTGGAAACCACTTTCAGATGTTGTTGATGGTTACTCTCC AACTCTTCCTCATCTTAAAGGTCTTCAAAATGGGGATACTGCTACCAGTGCTATCAAGCAGGTTGCTTCTGGAAGGTTTGGTGTCACCCCAACATTCTTG GCAAATGCTGATCAAATTGAAATAAAAATTGCACAAGGTGCAAAGCCTGGTGAAGGTGGACAATTGCCTGGGAAAAAAGTTAGCATGTATATTGCACGGT TGAGAAATTCTAAGCCTGGGGTTCCTCTTATATCTCCACCTCCTCATCATGACATTTATTCTATTGAGGATCTTGCTCAACTGATATTTGATCTTCATCA GGTAAACCCTAGGGCCAAGGTGTCAGTAAAACTGGTTGCTGAAGCTGGAATTGGCACTATTGCATCTGGGGTTGCTAAGGGAAATGCTGACATTATACAG ATTTCAGGGCATGATGGTGGAACGGGAGCAAGCCCTATAAGTTCCATCAAGCATGCAGGAGGTCCTTGGGAACTTGGACTTACAGAATCTCACCAGACAC TAATAGAAAATGGACTTAGAGAAAGGGTCATTCTCAGAGTTGATGGTGGCTTTAAAAGTGGAGTTGATGTCATGATGGCAGCAATAATGGGTGCTGATGA ATATGGGTTTGGGTCAATGGCAATGATTGCTACTGGGTGTGTTATGGCCCGCATTTGCCACACCAATAATTGCCCAGTTGGAGTTGCCAGTCAGAGGGAA GAGTTGCGTGCACGCTTTCCTGGTGTTCCTGGAGATCTCGTCAACTTCTTTTTATATGTTGCTGAGGAGGTAAGAGGCATATTGGCACAACTGGGGTATG AGAAATTGGATGATATAATTGGCCGGACAGACTTGTTGCGACCAAGAGACATCTCTCTACTGAAAACTCAGCACCTAGATCTAAGTTATCTCCTCAGTAA TGTTGGGTTGCCTAAATGGAGTAGTTCAACAATCAGGAATCAAGAGCCTCATACCAATGGTCCTGTTCTTGATGATGTTTTGCTAGCAGATCCAGAGATT GCAGATGCCATTGAAAATGAAAAAGCGGTTAGTAAGACTACAAAAATATACAACATCGATCGTGCTGTTTGTGGGCGTATAGCTGGCGTCATTGCAAAGA AGTATGGCGACACTGGTTTTGCTGGACAGTTGAATCTAACATTTACAGGAAGTGCTGGGCAGTCATTTGCATGCTTTTTAACACCTGGAATGAACATACG ACTTGTTGGAGAGGCTAATGACTATGTGGGCAAGGGCCTTGCTGGAGGTGAGTTGGTTGTCACTCCAGTTGAAAAGACGGGATTTCGACCCGAGGATGCA ACTATTGTGGGGAACACTTGCTTGTATGGAGCAACAGGTGGACAAGTCTTTGTTAAAGGGAAAGCTGGGGAGAGATTTGCTGTGAGAAACTCACTTGCCG AAGCTGTGGTTGAAGGCACAGGAGATCATTGTTTGGAATACATGACTGGTGGCTGTGTGGTTATCCTGGGAAAAGTGGGTAGAAATGTAGCTGCTGGAAT GACTGGAGGGTTGGCTTACATTCTTGACGAGGACAATACTCTTATACCCAAGGTAAACAGAGAAATTGTAAAAATCCAACGAGTGTCAGCACCTGTGGGG CAGATACAGCTGAAGAGCCTAATTGAAGCCCATGTTGAAAAAACGGGAAGTAACAAAGGTGCAGCTATTCTGAAGGACTGGGAAGAGTACTTGCCACTAT TTTGGCAGCTGGTTCCACCTAGCGAAGAAGACACTCCTGAAGCTAATCCCAAGTACGACACAACTACTGCAGAACAGGTCACTTTTCAGTCTGCTTAGGA TAATAATACGAGCCTCGATTACGCCAGGCCTTGGAGCCATTGTTGTGTCCTTGCTTTGTACAGGAATTGAAGAAGGTATATGATTAGGGTGGAGATGCTA ACCAAAATATGGGATATACTAATTATCCCATGTAACCAAAGGGATGCATCCATTCTGAAGGTCGTATTTGCCATTAGTTCCAAGCAACCCTTGTACATCC CATTTGAAGCATTAGCCTTCCCTTCACTTCAAAACTTCAGTATAGGACTATAGGCATTTGAAAGAAAAACTCTAAATAAAATGCTGTTCATGTGAATCTG TTTTGAAAGTTTGTGGATGGTGAAAATAAATTACTGGATTCATATGTCTGATCATCTCTCATCTGTCTGATCAAATGAAAAATTAATGTTTTTCACATGC ACTGTTGAAATACTTTAAATAACTTGTCATGATTTTTATTTTCTTTTTTTGCGTATGTTTTATTGTTACTCCTG BLAST |
Tissue | pods |
Gene name | LI_gene_159872; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_438752
Blastp | Ferredoxin-dependent glutamate synthase, chloroplastic from Spinacia with 86.65% of identity |
---|---|
Blastx | Ferredoxin-dependent glutamate synthase, chloroplastic from Spinacia with 86.65% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019437056.1) |
Pfam | Glutamine amidotransferases class-II (PF00310.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |