Ll_transcript_439456

• Id Trinity: TRINITY_DN48303_c1_g2_i6
• Name Transcript: Ll_transcript_439456
• Sequence: GTAGCAGTTGTGCACAAAGTTGGGTACCTAATACCGTAATAGTGCATCTCACTCTGCTCCAACCTCATTCCCTTATTATTCTCAAAACCAATTTCTCAAT CCTCACACTACTTCACTTCTTCTCTCTCTATTTCCTTCTTCTTATTCCTCCTCAACTTTCACATGGAAACCGGAGGGAAGGACACAAATATTGTTCTGAC GAAACCATTTTCATTAGGAAGTGAATCAGATAATTCAGATCCTAGCTATAGAGCCCCTAATATCCTGAATCGAATTTTAAGTCTACTGAAGAATGTCCGG CCAGGAACAGATCTCACTCACTTTCAGCTACCACCTCTGTTTAATTTCCCAAAGTCTCAACTTCAGTGCTATGGTGAATCAGTGTACTGTACCGGTTCGG ACTTGCTGAGCAAGTGTAACAGTGAGCAGAGTCCAGTGGAGAGGTTCAAATCTGTGGTAGCATGGAGCATATCTACCACACGCCCTACATCTTTTGCGGT TGCTCCTTATAATCCCATTCTTGGAGAGACCCACCATGTTTCCAAGGGCAATCTCAATGTGCTGCTGGAGCAGGTTTCTCACGATCCTCCAGTATCTGCC CTCCATGCAACTGATGAGAAGGAGAACATTGAGATGACATGGTGCCAGCAACCTGCTCCAAAGTTCTGGGGTATCTTCACATTTCTCTAGCAGCATAAAC AGCTAAAGTTCACACTCCCCTAACTTTGAAAAATGGTCTAAAAGTTCCTCTTTCTTTGCTTCATGAGCACTTTTGTTCTGTAACTATCAAAATGTGCATC ATCATGGTCATGCAATTTTCAATTTTGTGCATTTTGATGCAAAATCATGTCCCATGTTAACTTTTGGGCAGAAATCATCATTTCAGAGGTATAACCTTGA AATATAAATTAAAACATTAAACTTGGTTGCTTTTAGTTGTGACATAGCTAGTGATTAAAGTAGTTCATCCAGACATAATGTGTTAGCGCTGCATTTGTTA GAATTACTACAAATTATAGATTTTTTTTACTTTGATTAAAGTAGGCATGGGAACTGTACACTAAACCATGCTTATAAGGAAATCATCTTTCATCACATTA CCACATGATTGTTTTGGATTGTTATTATTCCCAAATGATCTAAAATAAGTACTTAAATCCTATTTTCAAGACAAATTTGAAGTTCTAAATGCTAGCCCCT TACTCAACAATGTTCTATAGATTCATGTGTGCATCACAAACTAAATATGCAGGCACATCAATTGAAGCTCAAGTGCACGGTAAAAGGCAGCTGAAGCTCC TAAATCACGGAGAAACATACGAAATGAATTGCCCTCATCTTTTAATTAGAATCCTTCCAGTTCCCAGGGTTAATTGGATAGGCAATGTTAATATACGGTG CCTAGAGACAGGCCTAACAGCTGATTTACTCTACACATCAAGCCATTCTTTTCTAGGAATTGGAGGTAATCATAGATTGGTCAAAGGGAAGATCCTTGAC TCATCATCGTCAAAAGTTCTATATGAAGTTGATGGTTATTGGGATAGCACTGTAACACTGAAGGATACAAATAATGGGGAGACCAGAGTGATATATGATG CAAAAGAAGTCATTTCAGGACTCCAAGCTCCTATTGTCAAGGCTGCACAGAGTGTGTGGCCAACTGAATCAGCCCTTGTTTGGAGTCAGTTGAGTCAAGC CATTCTGAACAATGATTGGGAGAAAGCAAGAGAAGCAAAGCAACTTGTTGAGGAAAGACAGAGGAAGATCATGACAGAAAGAGAGATAAGTGGAAAGGTT TGGGTTCCTAAGCATTTTGCAGTGTCCTACACTAAAGAAGGAGGTTGGGAATGCTCACCCATTCATAAATGGGTTCCTGCTGCACCTATCATAGCCTGAT AATCATTATTGTAATCATTATGTGACTATGAATATGATATCTTCAATTACAGCCCAAATGTCTCAGTATGGCATATGAAACATTGTAAAGTGACTCCATT TTTTGGTTAACTTCAATGCCTAAGAATAAAAGCCTAAAATGTGAGGCCAGCTTATCACACCAACTTGGAATTTCTATTTCCATAGCATCTAAATCATTTG TGGCATAAGGTAGCTGTTATTAAGAACAATTCTTAATTCTTCTGTAACTTTCTCTACAAGTTACAAGATTATACATGTTTATTTTTATATTTCGA
• Tissue: pods
• Gene name: LI_gene_159888;
• Additional information: details;

Expression of Ll_transcript_439456

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.5
• PS2: 0.4
• PS3: 0.4
• PW1: 0.1
• PW2: 0.3
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_439456

• Blastp: Oxysterol-binding protein-related protein 4C from Arabidopsis with 50.23% of identity
• Blastx: Oxysterol-binding protein-related protein 4C from Arabidopsis with 49.34% of identity
• Eggnog: Oxysterol-binding protein(ENOG410XRW6)
• Kegg: Link to kegg annotations (AT5G57240)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442475.1)
• Pfam: Oxysterol-binding protein (PF01237.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;