Ll_transcript_440249

• Id Trinity: TRINITY_DN48314_c1_g4_i1
• Name Transcript: Ll_transcript_440249
• Sequence: GCCAGACGTTTGGAATTAGAATCTTCAACAAAAAAAACAGACCCGAATGTATTTTTGGTTTATTTATGGTGCCATAGGAAAATAATCTACAAATAATAAT TTCTTCCCCGCGTGAGAAATCAGAACCAGTGTGCGGCCATCGTCATCAACCATGGCTCTACATCTCTTGAAACGAACCCTCGGAAGCCGCAATTTCGCAA ACCCTAATTTGAGGGCTTTCTCTTCTTCTTCCACTCCGATCCGTGCCACTCTTTTCCCCGGAGATGGTATTGGCCCCGAAATCGCCGAATCCGTCAAACA GATATTCCAAGCAGCTGAAGTGCCAATAGAATGGGAGGAGCACTATGTAGGGACTGAAATTGACCCTAGAACACAGAGCTTTCTAACATGGGAAAGTTTG GAATCAGTAAGGCGCAACAAGGTTGGCTTGAAAGGGCCAATGGCCACCCCTATTGGAAAAGGGCATCGTTCTTTAAACCTTACTCTAAGAAAAGAACTTA GTTTGTATGCTAATGTTCGACCTTGCTACAGCCTTCCTGGCTACAAAACTAGATATGATAATGTGAATCTCATCACAATCCGTGAGAATACCGAAGGGGA GTACAGTGGACTTGAACATCAGGTTGTGAGAGGTGTAGTAGAAAGTCTCAAAATCATTACACGTCAAGCAAGTTTAAGGGTGGCTGAGTATGCTTTTCAC TATGCCAAGGCACATGGAAGAGAGAGGGTATCTGCTATACACAAAGCCAACATCATGCAAAAGACTGATGGTCTTTTCCTCAAGTGTTGCCGTGAGGTTG CAGAGAAGTATCCCGAGATAAGATACGAGGAAGTTGTCATTGACAATTGCTGCATGATGCTTGTGAAGAATCCTGCACTTTTTGATGTATTGGTGATGCC TAACCTTTATGGTGATATTATCAGTGACCTCTGTGCTGGCTTGATTGGGGGTTTGGGCTTGACACCAAGCTGCAACATCGGTGAGGGAGGTATCGCACTT GCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAGAATTTGGCAAATCCAACTGCTTTGCTGCTTAGTGGTGTTACAATGTTGCGCCATTTGG ATCTCCATGACAAAGCAGACCGGATTCAAGATGCCGTCCTCAATACTATTGCAGAAGGGAAGTACCGAACTGCTGATCTTGGCGGCAGTTCAAAGACATC CGAATTTACTGCAGCAATTATTGGTCATCTTTAAACTATGCCTTGGAGCAAGAAATTGTTGCTTAAGATTTTATTTCAGTCAACTTAATGGAAAACTCAT CTAAAGTTTGTTGACCCTACAACCAAATACAAGGAATGTGCAAGCATTCAAATATTAGCTGCCCAATGCAGTCACACTTCTCTGTGAGGGGATGGAGATC TTACAGTTGAAAATGCTTCTCTATTGATAACCCTAAGTAGTCCATTTTACTATTCTTTATCAGTAATATAGCTGAATAAATGTAACGTGTGATGTTTCAA TTTTTCATCTTTAACACCTTTGGTGACTTGTGCGGGCTATTGTTTGCTTAAATATAATTTCGTAAAATTATTATTGTTACTAGTTTTTGTTCGTTGACTC AATTGTTAGGGGGATTCCATAATTAAATCACGCGCCTGGTTTCTGTACAACGATTCTCCTACTGTTTTAAAGGCTTTGGATCAATTGTCCTTCGTTCTCT GGACCAAATATGAAAAGTAGCAATGTTAAATATTATTGTCTGGGAAAAGATAATGAACAAAATTAGAACACGTTTGCTGC
• Tissue: pods
• Gene name: LI_gene_159966;
• Additional information: details;

Expression of Ll_transcript_440249

FPKM

• PAB: 40.9
• PNAB: 32.5
• PS1: 24.9
• PS2: 17.7
• PS3: 25.5
• PW1: 23.4
• PW2: 24.6
• PW3: 23.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_440249

• Blastp: Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial from Arabidopsis with 84.14% of identity
• Blastx: Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial from Arabidopsis with 84.18% of identity
• Eggnog: 3-isopropylmalate dehydrogenase activity(COG0473)
• Kegg: Link to kegg annotations (AT5G03290)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435274.1)
• Pfam: Isocitrate/isopropylmalate dehydrogenase (PF00180.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;