| Id Trinity | TRINITY_DN48314_c1_g4_i2 |
|---|---|
| Name Transcript | Ll_transcript_440250 |
| Sequence | CAGACACTCACTAAAAGACACACTTCCCGGAATTTGTGATCTCCGGCGAACCTCCGAAACTGACGTTGATAAAGGACCACCGTCGGAGAAGGGTGGTACT GGGCGGCGCTGCTGTATGATGGGATTTTGCATATGTCCGTTGGAAACTCCGGCGAGGTTGCTCTGGACTACTAGCTTCTTCCGTCATAAGTTAATGATCT TTTAATAATAATAATAATAATAATTTCATTTGAGTGTGAGAAATCAGAATCAGTTTGTCGCCGTTGTCATTAACCATGGCTTTACATCTCATGAGACGAA CACTCGGGAGCCGCTATTTCGCAAACCCTGATTTGAGAGCCTTCTCTTCTTCTTCCACTCCGATCCGTGCCACTCTTTTCCCTGGAGATGGTATTGGCCC CGAGATCTCCGAATCCGTTAAACAGATATTCCAAGCAGCTGAAGTGCCAATAGAATGGGAAGAGCATTATGTAGGGACAGAAATTGACCCTAGAACACAG AGCTTTCTAACATGGGAAAGTTTGGAATCAGTAAGGCGCAACAAGGTTGGCTTGAAAGGGCCAATGGCCACCCCTATTGGAAAAGGGCATCGTTCTTTAA ACCTTACTCTAAGAAAAGAACTTAGTTTGTATGCTAATGTTCGACCTTGCTACAGCCTTCCTGGCTACAAAACTAGATATGATAATGTGAATCTCATCAC AATCCGTGAGAATACCGAAGGGGAGTACAGTGGACTTGAACATCAGGTTGTGAGAGGTGTAGTAGAAAGTCTCAAAATCATTACACGTCAAGCAAGTTTA AGGGTGGCTGAGTATGCTTTTCACTATGCCAAGGCACATGGAAGAGAGAGGGTATCTGCTATACACAAAGCCAACATCATGCAAAAGACTGATGGTCTTT TCCTCAAGTGTTGCCGTGAGGTTGCAGAGAAGTATCCCGAGATAAGATACGAGGAAGTTGTCATTGACAATTGCTGCATGATGCTTGTGAAGAATCCTGC ACTTTTTGATGTATTGGTGATGCCTAACCTTTATGGTGATATTATCAGTGACCTCTGTGCTGGCTTGATTGGGGGTTTGGGCTTGACACCAAGCTGCAAC ATCGGTGAGGGAGGTATCGCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAGGTATGCTTTTAAAGTAGTTTTTCGACCATGTGTC ATCTACCTAAACCTTTCCATCTTGTCAGCATAGGATAAGAATTTATTGAATGTGTTTTGTATTTGTGCTTAATATGCCCTTGGTAAGTCAAAAATACTAA AAATACATCAAGTTATATGTTATACCCAACACATAAATACACATACACAAATATATTAAAATACTAAAAATATAAGTAATCCATAATCTTTCAGTTTTGA CAACTTGTGTTTGGCGATTCTTAGAGTGGAAGGTTGTGATTATGCCATGGTTGTGCAATTGCAAGATGCTTTCATGAGAAGTGGGCATGTGGGATTTTGA GATGAGAGTGAGTCGCCAAAAAGTGTAGAACTTGTAGAGAGGGAAAACAAAAAAGAAATTCGCAAAAGAAGGGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_159966; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_440250
| Blastp | 3-isopropylmalate dehydrogenase, chloroplastic from Solanum with 87.34% of identity |
|---|---|
| Blastx | 3-isopropylmalate dehydrogenase, chloroplastic from Solanum with 83.79% of identity |
| Eggnog | 3-isopropylmalate dehydrogenase activity(COG0473) |
| Kegg | Link to kegg annotations (102592957) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435274.1) |
| Pfam | Isocitrate/isopropylmalate dehydrogenase (PF00180.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |