Ll_transcript_440253

• Id Trinity: TRINITY_DN48314_c1_g4_i4
• Name Transcript: Ll_transcript_440253
• Sequence: CAGACACTCACTAAAAGACACACTTCCCGGAATTTGTGATCTCCGGCGAACCTCCGAAACTGACGTTGATAAAGGACCACCGTCGGAGAAGGGTGGTACT GGGCGGCGCTGCTGTATGATGGGATTTTGCATATGTCCGTTGGAAACTCCGGCGAGGTTGCTCTGGACTACTAGCTTCTTCCGTCATAAGTTAATGATCT TTTAATAATAATAATAATAATAATTTCATTTGAGTGTGAGAAATCAGAATCAGTTTGTCGCCGTTGTCATTAACCATGGCTTTACATCTCATGAGACGAA CACTCGGGAGCCGCTATTTCGCAAACCCTGATTTGAGAGCCTTCTCTTCTTCTTCCACTCCGATCCGTGCCACTCTTTTCCCTGGAGATGGTATTGGCCC CGAGATCTCCGAATCCGTTAAACAGATATTCCAAGCAGCTGAAGTGCCAATAGAATGGGAAGAGCATTATGTAGGGACAGAAATTGACCCTAGAACACAG AGCTTTCTAACATGGGAAAGTTTGGAATCAGTAAGGCGCAACAAGGTTGGCTTGAAAGGGCCAATGGCCACCCCTATTGGAAAAGGGCATCGTTCTTTAA ACCTTACTCTAAGAAAAGAACTTAGTTTGTATGCCAATGTTCGACCGTGCTACAGCCTTCCTGGCTACAAAACTCGGTATGATAATGTGAATCTCATCAC GATCCGTGAAAATACCGAAGGGGAGTACAGTGGACTTGAACATCAGGTTGTGAGAGGTGTAGTAGAAAGTCTCAAAATCATTACTCGTCATGCAAGTTTA AGGGTGGCTGAGTATGCCTTTCACTATGCCAAGGTACACGGGAGAGAGAGGGTATCTGCTATCCACAAAGCAAACATTATGCAAAAGACTGATGGACTTT TCCTCAAGTGTTGCCGTGAGGTTGCAGAGAAGTATCCTGAGATAAAATATGAGGAAGTTGTCATTGACAATTGCTGCATGATGCTTGTGAAGAATCCTGC ACTTTTTGATGTATTGGTGATGCCTAACCTTTATGGTGATATTATCAGTGACCTCTGTGCTGGCTTGATTGGGGGTTTGGGCTTGACACCAAGCTGCAAC ATTGGTGAGGGAGGTATTGCACTTGCTGAGGCTGTACACGGTTCAGCGCCTGATATTGCTGGAAAGAATTTGGCAAATCCAACTGCTTTGCTGCTTAGTG GTGTTACAATGTTGCGCCATTT
• Tissue: pods
• Gene name: LI_gene_159966;
• Additional information: details;

Expression of Ll_transcript_440253

FPKM

• PAB: 21.4
• PNAB: 39.2
• PS1: 24.6
• PS2: 12.6
• PS3: 18.2
• PW1: 26.6
• PW2: 30.8
• PW3: 18.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_440253

• Blastp: 3-isopropylmalate dehydrogenase, chloroplastic from Solanum with 87.42% of identity
• Blastx: 3-isopropylmalate dehydrogenase, chloroplastic from Solanum with 87.42% of identity
• Eggnog: 3-isopropylmalate dehydrogenase activity(COG0473)
• Kegg: Link to kegg annotations (102592957)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435274.1)
• Pfam: Isocitrate/isopropylmalate dehydrogenase (PF00180.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;