Ll_transcript_440258

• Id Trinity: TRINITY_DN48314_c1_g4_i6
• Name Transcript: Ll_transcript_440258
• Sequence: GCCAGACGTTTGGAATTAGAATCTTCAACAAAAAAAACAGACCCGAATGTATTTTTGGTTTATTTATGGTGCCATAGGAAAATAATCTACAAATAATAAT TTCTTCCCCGCGTGAGAAATCAGAACCAGTGTGCGGCCATCGTCATCAACCATGGCTCTACATCTCTTGAAACGAACCCTCGGAAGCCGCAATTTCGCAA ACCCTAATTTGAGGGCTTTCTCTTCTTCTTCCACTCCGATCCGTGCCACTCTTTTCCCCGGAGATGGTATTGGCCCCGAAATCGCCGAATCCGTCAAACA GATATTCCAAGCAGCTGAAGTGCCAATAGAATGGGAGGAGCACTATGTAGGGACTGAAATTGACCCTAGAACACAGAGCTTTCTAACATGGGAAAGTTTG GAATCAGTAAGGCGCAACAAGGTTGGCTTGAAAGGGCCAATGGCCACCCCTATTGGAAAAGGGCATCGTTCTTTAAACCTTACTCTAAGAAAAGAACTTA GTTTGTATGCTAATGTTCGACCTTGCTACAGCCTTCCTGGCTACAAAACTAGATATGATAATGTGAATCTCATCACAATCCGTGAGAATACCGAAGGGGA GTACAGTGGACTTGAACATCAGGTTGTGAGAGGTGTAGTAGAAAGTCTCAAAATCATTACACGTCAAGCAAGTTTAAGGGTGGCTGAGTATGCTTTTCAC TATGCCAAGGCACATGGAAGAGAGAGGGTATCTGCTATACACAAAGCCAACATCATGCAAAAGACTGATGGTCTTTTCCTCAAGTGTTGCCGTGAGGTTG CAGAGAAGTATCCCGAGATAAGATACGAGGAAGTTGTCATTGACAATTGCTGCATGATGCTTGTGAAGAATCCTGCACTTTTTGATGTATTGGTGATGCC TAACCTTTATGGTGATATTATCAGTGACCTCTGTGCTGGCTTGATTGGGGGTTTGGGCTTGACACCAAGCTGCAACATCGGTGAGGGAGGTATCGCACTT GCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAGGTATGCTTTTAAAGTAGTTTTTCGACCATGTGTCATCTACCTAAACCTTTCCATCTTG TCAGCATAGGATAAGAATTTATTGAATGTGTTTTGTATTTGTGCTTAATATGCCCTTGGTAAGTCAAAAATACTAAAAATACATCAAGTTATATGTTATA CCCAACACATAAATACACATACACAAATATATTAAAATACTAAAAATATAAGTAATCCATAATCTTTCAGTTTTGACAACTTGTGTTTGGCGATTCTTAG AGTGGAAGGTTGTGATTATGCCATGGTTGTGCAATTGCAAGATGCTTTCATGAGAAGTGGGCATGTGGGATTTTGAGATGAGAGTGAGTCGCCAAAAAGT GTAGAACTTGTAGAGAGGGAAAACAAAAAAGAAATTCGCAAAAGAAGGGAC
• Tissue: pods
• Gene name: LI_gene_159966;
• Additional information: details;

Expression of Ll_transcript_440258

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0.3
• PS2: 0.2
• PS3: 0.1
• PW1: 0
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_440258

• Blastp: 3-isopropylmalate dehydrogenase, chloroplastic from Solanum with 88.82% of identity
• Blastx: 3-isopropylmalate dehydrogenase, chloroplastic from Solanum with 88.82% of identity
• Eggnog: 3-isopropylmalate dehydrogenase activity(COG0473)
• Kegg: Link to kegg annotations (102592957)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435274.1)
• Pfam: Isocitrate/isopropylmalate dehydrogenase (PF00180.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;