| Id Trinity | TRINITY_DN48316_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_439789 |
| Sequence | ATTACTTCTTTTGCACGTGCTTTTCACACACAACCTCACCAACCTTAACGTCTCCTTCTATCTCAAAGAACAAAAAAGCTTACCACATTCACCTTGCCAA CTTAGTCACAAGACCAACGTGTATTCTCTCTACATATTTCACATAATATATATATATATATGCATGTATATATATATATATCAAGTAACACAACACAGCA CAATACCTATCTTTTCACCAAACTATTCCCAAAATAACCAAACATGGGTGATCAGCCACAAGGTGGTTACGGCGCTTCGGGAACCAGGCGCAAAGGTGCT GCCTTGAGGCGTGCTGTGGCGGCAGAGGGGCAAGAGACAGTGGTGGTATCACCTTGTGGTGCTTGCAAGTTCCTCAGGAGGAAGTGTGTTGCTGGTTGCA TTTTTGCACCTTACTTCTGTTCAGACCAGGGTGCAGCAAGGTTTGCAGCTGTGCACAAGGTGTTTGGTGCTAGCAATGTGTCGAAGCTCTTGTCGAATAT TCCTGAGAGCCACCGTCAGGAAGCAGTCGCGACTGTTTCATATGAGGCTCAGGCAAGGCTGGCTGATCCAGTGTATGGTTGTGTGTCTTCCATTTTTGCT CTGCAGCAACAGGTGGCATCTTTGCAAGCTGAGGTTGCTATGACACAAACTCAGCTTACAAATAGCAGGTATGCATATGTAACTGCTCTTCAGACACAGC AGCAGCAACTACAGCAGCCAAACATGAATTTAGCAATGCAGCCAGCATACTCTAACAATTCATCTGCTTCCACCAATTTTATGAACATGAGCAACTTCAA CCATGGTTTTGACCTTGCAATGGGGACAGCACCCTCATCACATAGCCTAGACCCTCTTCATCTCTCTCAGATGTCCCACTACGAGGATGAGGAAGAAGAA GAAAGCAAGATTCCGCCAATCTTCAACCATGACATTGGGCCTCACAGCCATTGAGTTTCCATTGTTTACTATGTTACATCCTTAATCCTTAATCCTATGT TAGATTAATCCTGTGTTTTGCCTATGATCCTTCTATTTTATCATATGTTTTGGCCTTTCATTGTATCCTTGATCTTTTATCATGTTAATCATGAACCTTT TATTTACTATACCAACAATTGAATTTTGTTTCAACAAAGGAAACAAACTCATCACCCCCGAGAAGAACATGTTTTCTAAGGATATGACATGAAAGTTTTT TAAGCAAGTCCATGCAGGTTTCCAATTGATCCATCATATTAGTGTAACTCAAAATACAACACCCTTGTAGTCAACTTATAGAGTATGTCACATTCATACA ACCCATGATATAGAGCGTGAAACAGGTGGATTGCTAATAATTTCCTAAATCCTACAGTCAAGCTGATAAATGAAAAGAAGTCTTCTAAAGAAAACTAAGT GGAACCTCAAAGGTCCAATTAAGGCATGGATCAATTGGATTATTTGGATCAATCATATATCCAATAATCATTGCACTGTATAAATTAGGGATACATATGA ACAAGATAATTTCTTGTTAAACACAAATAAAAAAATAAAAAAAATTTGTTTTATTAATTGTATTTTTATATAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_159975; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_439789
| Blastp | LOB domain-containing protein 20 from Arabidopsis with 53.85% of identity |
|---|---|
| Blastx | LOB domain-containing protein 20 from Arabidopsis with 57.14% of identity |
| Eggnog | lob domain-containing protein(ENOG410YA3N) |
| Kegg | Link to kegg annotations (AT3G03760) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428564.1) |
| Pfam | Lateral organ boundaries (LOB) domain (PF03195.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |