Ll_transcript_440842

• Id Trinity: TRINITY_DN48319_c0_g1_i7
• Name Transcript: Ll_transcript_440842
• Sequence: GTTTGCTTTGAATATAAGAGATTTCTCCATGTTCAAACCCAAGCATGCACTCATAGAATCTCAAATCCTGTTCTTTCCTGTGACTATTGTCTCTGTGTCT CTGCTTTGTATTGTTCTTGTGTATGTCACTGTCACATTCTCTTTCAATAACAAAAATCCATTCCATTCTTCTCACTCAACATTTTGGACTCTTTCTTCCT ACCATTCTTTTTCTGATCTCTGAACTCAGCCAAAAGTACAATTTTTCCTTTCCTTTTCCACTTCCTCACTCCACACGTTCCTGAATCTTACAACCCCTTC TTTATGTTTGATCAAAGGTCACAACCAAAAATGTCTCCACCTTTTGCTTCTTTCTGGGGTTGCTTTATCTATAGGGGTTGAAAGGATCAATCCTGGAGCC AGTGCAGAATTTCAGAAGCTCTTACTTTGTACTTTTTGAGCTTTAGTTTTGTGTTTTTATTTGAGGTGTTGTTACTGGTTGCATATTTGATCGCCTCTTT GAAACATGGGTTGTGTTCATACCAAGTGTTGTGGCAATGGCCGTACACAATCAGAGGGTGATTCTGAACATGGCAGTCACCGCGCCCAAAGGAAGCACAT ACTGACTCTGAGAGAAGTTGAGCTTGCTCCTGTTCCTTCTCACAACTTCAGATTGGAATACTCAGTTTTCACTCAAAGGGGATACTACCCTGATTCACCT GATAAGGAAAACCAAGATAGTTTCTGCATTAGGACACAAATTCGAGGTAATCCAAATGTTCATTTCTTTGGTGTGTATGACGGGCATGGTCAATATGGTA GCGAGTGTTCAAATTTTGTTAGGGATAGGTTGGTAGAAACATTGTCACATGACCCTGCATTGTTGGAGGACACTGTTAATGCCTATACTTCGGCGTTCTT GACAACAAATTATGAATTGCATAATAGTGAGATTGATGATTCTATGAGTGGCACTACTGCTATTACGGTGCTTGTTGTTGGAGACACCCTGTATGTTGCT AATGTTGGCGATTCGAGAGCGGTGCTAGCTGTTAAGAATGGGAACCGCATTGTTGCTCAGGACCTGTCATCTGATCAGACACCATTTCGGAGAGATGAAT GTGACAGGGTGAAACTTTGTGGGGCAAGTGTGTTGAGTGTTGATCAGGTGGAAGGTCTTAAGGATCCCAAAATTCAGACTTGGGGAGATGAAGAGAGCGA AGGTGGTGATCCCCCGAGATTGTGGGTTCCAAATACGATGTATCCTGGAACTGCTTTTACAAGGAGTGTAGGGGATAACATGGCTGAGTCTATTGGTGTC ATTGCTGTTCCAGAGGTCTCAACAGTTCAGCTTACACCGAATCATCTTTTCTTTATTGTTGCAAGTGATGGCATATTTGAGTTCCTATCAAGTCAAACTG TTGTTGATATGGCAGCAAGCTTTTCAGATCCCCGCGATGCTTGTGCTGCCATTGCTGGAGAGGCATATAAACTATGGTTGGAACATGAGAACCGTACAGA TGATATAACGATTACCATTGTTCAGATTAAAGGCCTGTCTAATTCAGGTACCTTTCGAGTCGGATCAAGTGAGATAAATGTCAGTACTGTGACAAGGACC AAGAGGGGGAAGGGAACTTCTGAGATATCTGCTTCCACCGGGTCAGATGTATCTCGTTCTGTGAGGAACGGTTACTGTGATTCACAGTCCTATCAGCATG TAGTCTCAACGAGAAGCCCAGCTATAGTTGCCCCCTCACCAGCTGGTCAAAGACCAATTGAATTGTGATTTAAGAGAGGCTTTATGGAAGCTTCACCAAG TCTCCTATTGTCTTCTAAGTGAACCACTGCAAGATGAGAACACTGAAACTTGATTTCCCTAATGTCACTGAGTCTCCACTCCTGATTTCAACATTTGAAG GGGATTTGCAAAGAATTTGAGAAAATGAAAGTGGTATAAGAAGATTGGGTGGTGCTAACTGACTTTAATTTGCATTAGTTGTGGTATAGTCTTTTTTTAT TGCACTTCAAGGTTAGTTTCATGTTACTGCAAATTAGTATCAGATGAATGATTATTGGTATGGACTGTAGAGTTGGGGTATAACTATTTACTCATTTTAA CAGTGTAATTGGTATGAATTAGTGTTTCATGTATTTAGATTTTGTTAGATGGAAATAATAATTTCTCCAAATAATTGCCAGGCATATTTTCATTTAAAA
• Tissue: pods
• Gene name: LI_gene_159997;
• Additional information: details;

Expression of Ll_transcript_440842

FPKM

• PAB: 2
• PNAB: 2.3
• PS1: 5.1
• PS2: 2.4
• PS3: 2.3
• PW1: 0.6
• PW2: 1.5
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_440842

• Blastp: Probable protein phosphatase 2C 35 from Arabidopsis with 70.94% of identity
• Blastx: Probable protein phosphatase 2C 35 from Arabidopsis with 70.94% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT3G06270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419562.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;