| Id Trinity | TRINITY_DN48327_c4_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_440707 |
| Sequence | ACTTGTACAGCCAAGGTTATGGAGTGAAAACAGCAGCATTGAGCACAGCACTTTTCAACAATGGGTTAAGTTGTGGTGCTTGTTTTGAGATAAAGTGTGC AAATGACAAAGAATGGTGCCATTCTGGAAGCCCATCAATATTTATTACAGCCACAAATTTCTGTCCCCCAAACTATGCTCTACCAAATGATAATGGAGGA TGGTGCAACCCACCTCGTCCACACTTTGATCTTGCCATGCCTATGTTCCTTAAGATTGCTCAATATCGTGCAGGCATTGTTCCTGTTGCATATCGAAGGG TGCCATGCAGAAAGCCTGGTGGGATCAGGTTCACGATCAACGGCTTTCGTTATTTCAATCTTGTTTTGATCAGCAACGTTGCGGGTGCAGGGGACCTCGT TCACGCCTATGTTAAGGGTTCGCGAACCGGGTGGATGCCGATGAGTCGAAATTGGGGTCAGAATTGGCAATCTAATGCGGTCTTGGTTGGCCAGGCCGTT TCATTCCGGGTCACGGGTAGCGATCACCGCACCTCCACATCTTGGAATATCGTTCCGCCCAATTGGCAATTCGGACAAACTTTCAGCGGAAAGAATTTCC GGGTTTAATCTCTTATTACACCAATCACCGCCCCCTCCTTATATATCTTTTAAAATATAGTGTGATTAATGATATTATCATACTCTTTTTCTCTCCACAT CCTTTTAAGAAGGGGCGTGGTACAAAGAAAAGAGTGTGAAATCAACATTATTCATAATATAAAGGACCATCTAAGTCAACCCCTAAGATACTAGTTAAGG AAGAATTGTTAAGTTTTCATCACATGATTTTTTTTCATGCATCGTGTATGAATTAAAACTTAAGGGCTCTAGTAGCATTATCTTAATATAAAAAGAACAA GTTCTTTTTATTGTTATTTCCCACTAGTTTTGCAATTCCATTTATACCCTTTTTTGCGCCCATTTTCAATGTTTTGGTATTAAAAAAGAGGGTGAATGAG TGAGTGACAGCATCTTATGACATATTGACTTATGTTTCTGATTGGTGGAATTGATTAATAGTTAACAGTAATATATAATTCGAGGTGTATCATTGGGATG GAGATCTCCTATCCCCAAATATGTCTCAAACCATGTACCAAGACAATCAGAATAAAAAATAAATAAAAACATGAATATTTAATTTATTTTACTGATGTTG TTATTCGTTTGGTACAAAGTTTGGGATAGAGTTTGAGACAACAGATCTTTGTCCAAATATTCCAACCAATAAGGCAAATATAGTTAATATCAAACGTAAC TATAATATATTGAGGCATTCATAAATAGAGTTCACAAAAGTTAGTATCGAACTATAACATACATGATTGTGGAATTTGGATGTTGCAGACAGACACAGCA TCCGTTCTTATGGAGGCTATTGGATACATTAAATTCCTTCAATGCCAAGTCGAGACATTGAGTGTCCCATATATGAAGTCATCCCAGAACCACAACAACA GACTCATGCAAAGGGGTTCAGCCATAGGCGACACAAATGAGGAACCAAAGGAAGATCTTAGAAGCCGAGGTCTATGTCTTGTACCATTGTCTTGCATGTC ATTCATAGCAAGTGATGGTGGCACTGAGGTGTGGCAACAAACTAACTTTGGTGGAGCAACTTAGTGGTACCTAGTACCTTGTTAAATTTTAATTAAGTTC AAATAATCATTCAAATTAATGTTGAGCATGACCTTAGGGCAAAAAGAATAAGAAATGGAGCAAATGGGTCATTGAACTTCTAAACCTATCTTAATACATA TCCCATTTTCGTGCTTAATGGAGCAAACTTGGTCATTCCTTTCTCATAGTCAAGGATAGCCAAGTTAGATCCATTAAAACATCATGTATCATTAATTTAA TTACTTTTTGCGACTCATTGTTAATGGAGGCTGGTATAATTTTATAGCCATGTTAATCATCAACATTGATTTAAAGGTTAAAGTGTTATTTTAACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_160091; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_440707
| Blastp | Expansin-A4 from Arabidopsis with 87.06% of identity |
|---|---|
| Blastx | Expansin-A4 from Arabidopsis with 87.06% of identity |
| Eggnog | expansin(ENOG410YEM2) |
| Kegg | Link to kegg annotations (AT2G39700) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447954.1) |
| Pfam | Lytic transglycolase (PF03330.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |