Id Trinity | TRINITY_DN48334_c0_g3_i11 |
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Name Transcript | Ll_transcript_438539 |
Sequence | ATAAAATGGTAGAAAAACCATGCTCTAAGTTCTAACTCTTAACTCTTAGCGGTGGTGGTTGTGGTACAAAAACCATTCTTCTAACTCTTTCGCCGCCTCA AAAATCTTGACTTCTCTCAACTCCGTCGCAACCTTCGTTTCCGTACAATGTTATTTTCTCGCTTATCAAGAAACGTAAGAAGCAACTTCAACCGTTGTCG ATGGTTTCTGTCCCTCGATGACCAGAACCACCGCTTCCTTTTATCGCATAATTATCACTCACCTAGAAATTCAATTGAACAGGTTATGGCAAGTTCAATT TTTTCAAAGGGTCTGCCAACATTGCATAGTAGTAGATATCAAATCCATCATCAAAGCAGCTCCATAGTTGAGGATGAACTTGATCCATTTTCACTGGTTG CTGATGAACTATCACTTATTGGTAACAAGCTGCGGGCAATGGTAGTCACTGAGGTTCCTAAGCTTGCATCAGCTGCTGAGTATTTCTTCAAAATGGGGGT GGAAGGAAAAAGATTTCGTCCTACAGTTTTATTGTTAATGTCAACTGCACTAAATCTACCAATACCCAATGCTTCTCCTCCTATTGAGCTAGACGATACT TTGGCTACTGATCTACGTTCAAGACAACAATGCATAGCTGAAATAACAGAGATGATCCATGTGGCAAGCCTCCTTCATGATGATGTATTGGATGATGCAG ATACCAGGCGTGGTATTGGTTCATTAAATGTTGTAATGGGAAATAAGTTGTCAGTGTTGGCTGGAGATTTTTTGCTTTCTCGGGCTTGTGTTGCTCTAGC CTCTTTGAAAAACACAGAGGTTGTGTCTTTGTTGTCAAAAGTTGTAGAGCATCTTGTAACTGGGGAGACCATGCAAATGACTACAACATCTGATCAACGG TGTAGCATGGAACATTATATGCAAAAGACATACTACAAGACTGCCTCCTTAATATCAAATAGTTGCAAGTCAATAGCCATCCTTGCGGGGCAAACAACAG AAGTAGCTATCCTTGCTTTTGAGTATGGAAAAAATCTGGGTTTGGCATTTCAATTGATAGATGATGTGCTTGATTTCACAGGCACTTCGGCTTCACTTGG AAAGGGGTCTTTATCAGACATTCGCCATGGAATTGTAACAGCTCCAGTGTTGTTTGCAATGGAGGAGTTCCCTCAGTTGCGTGCAATTGTAGATGAAGGC TTTGAAAACCCTAAGAATATTGACCTTGTAAGTTAAAATGATGCTCTTTGCTGCATGTGTTGTACATAATTAGATCTTATATGGCACTAAACAAGAGAAA CAACTACTTTGAAATCTCTTTCGGTGAATCTGCCATTTTAGAGGTTTAAATTGGTTTTGGTAAGATCATTAACAAGGTATTGGCGTATTGGCATCTCTAA TAAAGTAGTTCCGCATATGATCCCTATTGTTCACCACCTTTATAATTAAGATTTAAGATTTTAAGGTAGAGATATTAGTGAGCCCCATTTTTCTCTGCAT TTTGAAATGATCTTTGATAATAGTTTTGAAGGGTTTACTCCAATGAATACTGCCCTTAGTAGAAATGATTGAAAATTAAAATTTCTAGTTTTCTTTGACA CCAACATTCTTTATTTGCTTGGCCTCTTGAAGAATTATTAAGTTTGACCCATTCGAACCTACTTATCTAGAATTCAGATATGTTGCTTGAGTTGCTCATA TTCTAGTTTGTTAACCAAGCTGTTTAGCATGATTTGTTGATGATGATGCTTAGATATAGAGACAATAAATCATATAACGGTG BLAST |
Tissue | pods |
Gene name | LI_gene_160136; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_438539
Blastp | Solanesyl diphosphate synthase 3, chloroplastic/mitochondrial from Arabidopsis with 66.76% of identity |
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Blastx | Solanesyl diphosphate synthase 3, chloroplastic/mitochondrial from Arabidopsis with 66.76% of identity |
Eggnog | synthase(COG0142) |
Kegg | Link to kegg annotations (AT2G34630) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459008.1) |
Pfam | Polyprenyl synthetase (PF00348.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |