| Id Trinity | TRINITY_DN48334_c0_g3_i12 |
|---|---|
| Name Transcript | Ll_transcript_438545 |
| Sequence | ATAAAATGGTAGAAAAACCATGCTCTAAGTTCTAACTCTTAACTCTTAGCGGTGGTGGTTGTGGTACAAAAACCATTCTTCTAACTCTTTCGCCGCCTCA AAAATCTTGACTTCTCTCAACTCCGTCGCAACCTTCGTTTCCGTACAATGTTATTTTCTCGCTTATCAAGAAACGTAAGAAGCAACTTCAACCGTTGTCG ATGGTTTCTGTCCCTCGATGACCAGAACCACCGCTTCCTTTTATCGCATAATTATCACTCACCTAGAAATTCAATTGAACAGGTTATGGCAAGTTCAATT TTTTCAAAGGGTCTGCCAACATTGCATAGTAGTAGATATCAAATCCATCATCAAAGCAGCTCCATAGTTGAGGATGAACTTGATCCATTTTCACTGGTTG CTGATGAACTATCACTTATTGGTAACAAGCTGCGGGCAATGGTAGTCACTGAGGTTCCTAAGCTTGCATCAGCTGCTGAGTATTTCTTCAAAATGGGGGT GGAAGGAAAAAGATTTCGTCCTACAGTTTTATTGTTAATGTCAACTGCACTAAATCTACCAATACCCAATGCTTCTCCTCCTATTGAGCTAGACGATACT TTGGCTACTGATCTACGTTCAAGACAACAATGCATAGCTGAAATAACAGAGATGATCCATAGTTGGTTACAGCTGTCTATTATAGACAATATATGTGCAT ACAAAGCTAAGCCCACTCTAGTAGTGTAGCCGTACAGGGTCTATCCAAAATAGCTACTAAGGTGGCAAGCCTTCTTCATGATGATGTATTGGATGATGCA GATACGAGGCGTGGTATTGGTTCCTTAAATGTTGTAATGGGAAATAAGTTGTCAGTATTGGCTGGAGATTTTTTGCTTTCTCGGGCTTGTGTTGCCCTAG CCTCTTTGAAAAACACAGAGGTTGTATCTTTGTTGGCAAAAGTCGTAGAGCATCTTGTAACAGGAGAGACCATGCAAATGACTACAACATCTGATCAACG GTGTAGCATGGATTATTATATGCAAAAGACATACTACAAGACTGCCTCCTTAATATCAAATAGTTGCAAGGCAATAGCCATCCTTGCAGGGCAAACAGGA GAAGTAGCTATGCTTGCTTTTGATTATGGAAAAAATCTGGGTTTAGCATTTCAACTGATAGATGACGTGCTTGATTTCACCGGCACATCGGCTTCACTTG GAAAGGGTTCTTTATCAGACATTCGCCATGGAATTGTAACAGCTCCAATGTTGTTTGCCATGGAGGAGTTCCCTCAGTTGCGTGCGATTGTAGAGGAAGG CTTTGAAAATCCGCAGAATATTGATCTTACTTTGGAGTATCTTGGCAAGAGCCTAGGCATACAGAGGACCAAGGAGCTTGCAGTGAAGCATGCTAACCTA GCAGCAGCAGCAATTGATTCCTTACCTCAAAATGATAATGAAGAAGTGAAAAAATCAAGAAGAGCCCTAATAGATCTTACTCAAAGAGTCATTACAAGAA CAAAGTGAAAATGAAGCCTAATTTTTTATTTGTTTTAACTAAAAGGAGCTTCATAGTTAATTAAAAACTGGTTTTTGTCATTATTCATTTTTTTCCCATA ATTGTTCCTTGAAGCCCAAAGTTGTGGTGGAAATAAGCTTTTTGTAGAATCAATGTGCTTGTTTGTGTTTCTTGATTATTTTTACTTCCTTCTTATGTTG TAAAAATTGATTCGTGCATGCCATTTCAACCATTGAACCGGTCCCAATATTAATAGGGTACAATAATTGTATTGGTCATATAATTATACTGGTCAAAATT AGTCATACTGGTTGGTTTTCAATGAATTGTACTGGTCACAGCAGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_160136; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_438545
| Blastp | Solanesyl diphosphate synthase 3, chloroplastic/mitochondrial from Arabidopsis with 78.48% of identity |
|---|---|
| Blastx | Solanesyl diphosphate synthase 3, chloroplastic/mitochondrial from Arabidopsis with 80.24% of identity |
| Eggnog | synthase(COG0142) |
| Kegg | Link to kegg annotations (AT2G34630) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422348.1) |
| Pfam | Polyprenyl synthetase (PF00348.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |