| Id Trinity | TRINITY_DN48335_c1_g7_i1 |
|---|---|
| Name Transcript | Ll_transcript_441081 |
| Sequence | AGCAGCCTCAGCAAGGTAACAATCAACCAACTTAGCTACCTTAACCAAAGAAGCACCACTCTTAGCTCCTTCACTATCCAAACTCACAAACCTCTTAACC AACCTAATAACAAGTTCAACATCTAATAGTGTTCCACAAGTGTGACTAAAAGATGGCATAACAAGCTCCTTCAATGAAGCTTGGTCTAGCTGCCATGAAA TCCTCTTCTCAAGCTCTTCTCTATAAGTTCCTTCAACACCAACCATGTTAGCTGTTCTTAGCAGTCTTAAAAGGAAGTTGCATGGGATTGAATCCTTCTC TGGTGGAAGAACTCCTACTAAGGTTTCTACATAGAACCTTTTCTTCATCCATGAAGCTGTTACACTCTCAGGTGATTCTTCAAATTGTGTAAGACCCTTT TCAGCCAGATCAATGGTAGACAAATCAGGGAGCCATTTTGAGGCATAGTGTGTGATTATGGAACCAATCAAATCGGCGCGAACGCCTTTCGCCTTGATTC CTGAGAGGGTCTTGACAAAGTAATCCATGTCCAAAATGCATGCATCATCAAACCAGCATTCAGAAAAGAATTGAGAGTAGTGAGAAGGAGATTTTGCTGG GAAATTGGGGGTATTGCATTCTTGTTGGTATGATTGATTCTTCATTTTGGTGAAAAGTTCAAATAGAGTAGCAGAAGGGTAATTATTTGTTTCTGCTTCT ATGGTAGCTTTCTTAGCCATATGTTGCATTATTAAGTATAGAGAATGTTCAAAATATCAGATATATTCTTGAGTTTTGAACTTGTTGTGGCAAGTATATT TTCTTAACAAGTTCTATCTAGGAACAAAGATGATAGATAAGGCATGTTGAGCCTTTAGATGATAAGGACCACACATACATGCAACATTTATTTCTTTCCT AGTAGACAAAACAACTTGTTCACATTCCCTTTATGCACTATATGAAGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_160149; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_441081
| Blastp | Coleoptile phototropism protein 1 from Oryza sativa with 38.38% of identity |
|---|---|
| Blastx | Coleoptile phototropism protein 1 from Oryza sativa with 38.38% of identity |
| Eggnog | cellular response to blue light(ENOG41110QX) |
| Kegg | Link to kegg annotations (4329720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443023.1) |
| Pfam | NPH3 family (PF03000.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |