| Id Trinity | TRINITY_DN48344_c6_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_439975 |
| Sequence | CTCTAATGCGGTTCACTCCAGCAGAACAAAAATAAAGAAAAGCGCAAACTGCCAAAATCCTTCACACGCATCTTTCCTTTCCCTTCTCCCGAGAAAATCA AATAACTTTCCCGAGAAATTCAAGAAGAAGCGAAGAACAAGAAGAAGCATCGATGAGTTTCCAACAGTGATTGATCGCAAGCATTGCAGGACGATGATGA GGTCGATCCCTGATGGAACCAAACCATAAGAATCTATCAACCGATCTACAACATATCAAACTCATCGAGTGGGAGGACTTCGAGCACGATCTTGCTAGGT TATCGAGTCTCTCTTCCGCACTCAACGAATCTAAGAACAAGAAGAAAATTCTTCAGGACAAGCTCGAGTCTCTCATTCAGGTCAATTCTGAGTCATTGGG TCGATTGAATGAACTGGAGGAGATGCATCAAAAATTGGAAATGAAGAAAATGATGATGGAGCGTATGACTATACGTTCTAGGTTAGCAAAGGAGGATGTG AGCAAGCAGGAGGAGCAACTTAGTGGTGCAGTCCAATCACTTTTGGTGGCGGGGGGTGCTCTATCTGTAGCTAACAAAAATCTTCAGGAATCAAGTAGAT TACTGTTTGAAGAAGAAGGTTATGTTCACTTGAGAAACTTGCAAAAGATGCTAAGGGTGAGGCAACAATATATGACATCTCAAATTTCAATGTTATATCC TGTAAAGATCTTTGTCGGGCCTGCACAAGAGCAGGAGCTTGAAGCATATCCTGCAGGTAGCATAGCAGGTAAGTTAGTTCAGTAATTAGTCATTTTCTTG TGGATTTAGTACCCCTGAGATGATAAATGACAGAGCTTATACAAGAAAACGAACTTGCAATATGAACTAAACTGTGAAATTAGGTGCTGGATGGTTTAGT CACTCTCTATTGGTTTTTTAATGGAACCTCGGATTTAGTTTCCTCTATATCAGACTGTTTTGTTGAAAAAGGATGTCTCACGTTCTGTGCTTCATCTACC CCGTGAGCCGCACCATCCTTTTCTTTGATGCTTCTGCATAGGTTTTGTTTCATGTCAACCACCTTAAGCTATTTTTAAATAAAAGCCATATCCATGACTG ACGGACAATTTAGTGACAGTTGACACCCATTATTAAACTCAAAAGGAAATTACAATTACATTGCTTAATACATAGAATATGTTTACCTGATACATTCTTC TGTCTTTTTCCATAGAACAAAAGCATGATTCTTTTGGCATAGTATTACAACTCGTATTTCTCTGGGGCTCTGTCATGATGACATTTGATTTTTTATTCTA ATGTTGAAATCTTGTATTTATGTCGTAAACCTTTATACTCGAAGATAATTGACAAACTCACATTTCACTAACCCTTTGAACATTCATCCATTTAATTAGT AATATTGTCGTTTCTTGTTACTTTTCTTAATAATGTACAAGAGTTTCAGGATATATTTTACAAAATGGCATGGATGCACTAGAAGATCATAGCAATCCAG TGGATATTAAGATTAGTTTCTCGTGCTAATTTAGATTGCCACAAAAAAGGTGGAGAAAATAATTGTTGAGGGAAATTTTAAATGTAGTTTTTGAATAGAA TTTTGGTCAGCTAAACTACTTTATAATTTGTATGACTTGATAACAATTTGAGCAATGCTCAAGTTGTCTTGACTACTGCATTAGATAATATTTTCTGAGT TATATAATGATGTTTCATCAAGTATGTTTTATGATAGAGCATTATGGCATCGTTCGGTCCATGTGGCCAACCCCACCTTGTGGGATAAAGGCTTGGTTGT TGTTGCATATAAATGATGCTTCTTTTTCTTAAGAGTTGCCTTTATTTCAATATGTAGGGACTTCTGGTGGACTTAAACCAATTAATCAAAGATCCTTGAC AATTCAAGGTCTGCATTTGACAATGCTATCTTTTAGGAAGGTGAGCTTTTTCACTGATAAAAAGGAATTTCAGAGATCCGCCACTGCCCTAGGATATGTT GCACATGCGGTTTCACTCATAGCCTCGTACTTGCAAGTTCCTTTGCGTTATCCTTTACGGTTGGGTGGCTCTCATTCATATATTATTGACAATGCACCTT CAATAGAATCAACATCTTCTGATGCTTCATCAAGTGCATTGTCTTTTACAAATGGCAAGCATATCGAGTTTCCCCTTTTTTTAGAAGGTCAAGACACAAC AAGAGCAGCTTATGCTGTATTCTTGTTAAATAAGGTATGTCATTTCATTTAATATTTGCTCAGTAGCAAATCCCAATTTCCCATGCACTCACTAGTTGGG AGCCTCATGAACTGGGCTGCCATTTTTTATGAATTTAAGTTTGTTGGCTGGACTTTGGTAAAACTAAATAGTGATAGTCTCTCTCTTGCTCAATGGTTCC TTCAGAATTCCAAAGGATCCAACTCGGTGCATATTTCTGTTAATACTTTTATGCCTTATTTTATTTCACAAGATTATATGAGCTGATTATGAGTCTATGA CCTTTGTTTTCTCCAAAATTAACTGCTTGGCTCACATCAGGTTCAGTGAAATAGATATGGGGAAGATATTTTATGCATCTTCTAAATTTTATTCACATGT AACGAATTTTTTGGTTAAGATATTGTTTTGGCCTTGCTCTTGATTTCCAGTGTAAACGAACAGAGACTGAATTGGCAGACCTCCAAGTTAACTGAGTAAA AAAGCTGTATTAAGCTAACTGGAACTGCGGAGGGTTCCTCTTCCAGATTTAACTTTTTCTTCTTTCCTTTTCCTCCTAACCCATTGTTTATTTCATACTT TTATGGCATAAAATATGAAAAGTTTGTTACTAGTTATGCTTACATGCTATGCTTGTTTTCTCAGAAATATTTCCTTAAGAAATCATCTAGTAATTCCAAC CTCGTACAAAATATTTATCAAGAATGAGATTTATATTTAAAGGCTGGTGCCTGGTTGTTTGCATTGCTGTTGTCAGGTAGTATTGGCTGAAACTTGTGTT TGTATTATCTGAAATATGTGGGATTGTCTCTCTTGTTCCCCATGCTTTGGTAGTGGCCTTCCCCCTAAAGCGTGGCTGTCTGAGTGGGATTTCTTATTGA TTATACTGTTGGTGTGTGTCTCTTCTAAACTTAATGCTAACTTTCCTTGTTGCTTTTCTCATTGTAGGATTTAGAGCAGCTTTTGAATTTCATTGGTGCC AAGAGTTTGGGACCTCGCCATGTATTGGCTAATTTGAGGGAGCTTTCAAGGATTATCCAGTCTTCAGCTTTTATTGACAACTTGATCTAGTATTTTACCT CAGTTGTAAGTTTTTGTAAATTGATTTTTGTAATTCTTACACGGGTGCAATTTTTTGTGTGCACCTTCCCATATAGCATTGTTATCAAACTTGAAGCAAG CTTTCTATAATGAATTTGGTATTCTTTCAGTATAATTGCTGTTGAAAATATTGTTTTCCTAAAGAACATAATGTGGGGATCTCAGATGCATTATTGTCTG AATAAAAGGGACAAAAGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_160221; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_439975
| Blastp | - |
|---|---|
| Blastx | UV radiation resistance-associated gene protein from Homo with 42.35% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464649.1) |
| Pfam | - |
| Rfam | - |
| GO | - |