| Id Trinity | TRINITY_DN48347_c3_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_439754 |
| Sequence | TTCACTCACTCTGTCTTATATTTTCAGAATGTGGCATAGGGGTGAGGAAGAGAAGGAGTACCCTCCTCCACTTGCTTCTCATGAGGATTTAGTGAAGGAC CCCAATGTGTTCTGGGACACTCTTAGGCGTTTTCACTTTCTTATGGCTACCAAATTTATGATTCCTGTGATCGGAGGAAAGGAGCTGGATTTGCACGTTC TTTACGTTGAGGTTACTAGGAGATGTGGCTATCAAAAGGTAGTTGGTGAGAAGAAATGGAGGGAAGTGGGTAACGTGTTTAACTTCTCAGCTACCACTAC TAGTGCTTCTTTTGTGCTGAGGAAACACTACCTCACTCTCCTTTATCATTATGAACAAGTTCATTTCTTCAAACTTCAGGGTCCCATGTTCACTCCATCA CCACCGGATGCCGCTTCTGCGAGAACCCATTCCTGGAGACCGGAATTAGCTATCGTAAAATACTCGCCTAACCCGATAAAAGATCGTCCTGATTCCCATG CTCAAGGTAAATTGGAAAATTCTTAAGCCAGGATTGTTCTTGTTCTGACCAGTTGTTATTGAGATGAAGTATTTCAAATAGTGGCAACATTGCAGTTGTG GTAATCTTCATTGTGATTGTGGTGATCTCCATTGCGGTTGTGGCTACATTATCTGCATTGCAATTATTCTTCATTTATTATTGGGGAAGGGACCATCGAG GGAAAATTTGAATGTGGTTATTTAGTGTCTGTGAAACTGGGTTCTGAGGTTCTGAGAGGGGTGCTTTATCATCCAGACCCATCAGTTCCTCCAGCACAGG TTCAGCAATATGAGAATGCTGTTGTACCATTCAGTAAGAACAACAAAGCTAGCAGTTCTGGGAGAAGAAGAAAAAACAAAAGAAGGTGGGACCCCAACTA CCCAAAGCCCAATAGGAGTGGCTACAACTTCTACTTTGCTGAGAAGCATTACAAGCTCAAAGAACTTTACCCAAATAGAGAAAGGGAGTTTACCAAAATG ATTGGCCATTCATGGAATTGTCTTAGCTCTGAAGAAAGAATGGTAATAAATAGAAAGGTCTTCCTTTGATTTTTTTCTCTGCATTATAATCTGTCTTTTT TGCATTATGTGCATCTTTGTTATCTCCTAAAAGATGACATTTCTATAGATGTTGTTGTGGACCATAAAAGAGAACTTGTAATAACATTTTTATCCTCTTG TTTATTATTAAATCACAATTTTGATATTGAAAATATGATTAAAAACAATCACTTGTCTCTCCATTAATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_160244; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_439754
| Blastp | High mobility group B protein 9 from Arabidopsis with 69.93% of identity |
|---|---|
| Blastx | High mobility group B protein 9 from Arabidopsis with 54.03% of identity |
| Eggnog | At rich interactive domain(ENOG410Y2AP) |
| Kegg | Link to kegg annotations (AT1G76110) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416659.1) |
| Pfam | ARID/BRIGHT DNA binding domain (PF01388.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |