Ll_transcript_439773

• Id Trinity: TRINITY_DN48347_c3_g4_i6
• Name Transcript: Ll_transcript_439773
• Sequence: GGTACATATAGCATGAAGTTACAGGGATGTAGAGTTGAATATTATTATACATGATTGTCTTTTATATGTTATTTTGTATCACTTAACTCTCTATTAAAGA TCTTACACTATATCTTTCCCGGGAAATAGATAACGGTAGAACACGTGTGCCACTTGTTACCACCAGTCATTCTGTGATGATGAATTGCTGAATTTCCTTC TCCTTCCTCATTTCCCATTCTCATTTCTTACAACTAAATCATTAATCATTTCTACCTCTCCTATGGCACTTAATTCACTTTCCATTTGTTCTTTTAAATT ATCTTCAACCTCCAACATTACTCATTCGCATTCAAAACCATTTACACTAGTCTCGCAAATTAACTCACACAGAAATCACTCTCAAGAATCCAATAAATGG AGAAAACTGGTTTCCGCAACGCTGGCAACGGCGGTTATTGCATTCAGTTCTGACATATCTGCCCTTGCTGATCTTAATAAGTTTGAGGCTGAGGTGAGGG GTGAATTTGGAATTGGCTCTGCTGCTCAATTTGGTTCTGCAGACCTCAGGAATGCAGTACACGTCAATGAAAATTTCAGAAGAGCCAATTTCACAGCTGC TGATATGAGAGAATCTGATTTTAGTGGTTCAACTTTCAATGGTGCATACCTTGAAAAAGCTGTTGCATACAAGGCAAATTTTACAGGTGCCGATTTTAGT GATACATTGATGGATCGCATGGTTCTAAATGAAGCCAATCTCACGAATGCCATTCTGGTGAGAACAGTTCTCACACGTAGTGACCTTGGAGGTGCCATCA TTGAAGGTGCTGACTTCAGTGATGCTGTGTTGGACCTTACCCAAAAGCAGGCTCTATGCAAGTATGCCAATGGCACAAATCCTGTGACAGGAGTAAGCAC AAGAACAAGCTTAGGTTGCGGGAACAAACGAAGAAATGCTTACGGATCTCCATCATCTCCCCTGTTAAGTGCTCCCCCACAGAAACTTCTCGACCGAGAT GGTTTCTGTGATGAAGCAACAGGTCTCTGCGAGGCAAAATAGTAATACTTGGTATCGTCACTATTGCATGGCCACATTCATGTACATGTATTTGGAGTAC AAGTGAGGCATCATTTGCCTTTGGACTTCTGAGAGCATATTCGCATTAAACAAATGAAGCTCTTTCTTGAACTACCCTAATTGTTCTGTGTCTGTGTGGG ATAGTTAGGTCTCTTTTCAGCAAAAGGGAACCTATTTTGTGCAGCCAACCTTTCTCCCATGTAAGATATACTCCCATATTTGTTGAGAACATAGAATTAT CCTATGTATTTTGGCCATGGTCTCTCATCCATATGACAATACTTTTATGATCCTCGAAGTTCGATTACCTGTTTACATTTATATTAAAAGTCCATATTTA TACAAAATTAAGAGTAATCTGTCCTTGCATCTCCCATGTTGGAGGGATGTGTTGTGGCCTTGTGGGTATATTATTCTGTTATTTGAACACAGATTCAACA CTCAAACTGCATCCTACTTATGCATACAATTCATTTATTACAGCTTGGTATATGATATATAAAAGCATCCAGCCACATTCATACCCAGATACTGTATTCA GTCAGGTGTTCAATACCGAGTGTACAAGACGAACTTTTCTTAGCAGCTAGTGTGGTTAAGGATTCCCAGACCTATTTAGTTCATTTTTCTTTCAGTGCAT AAACTTGTGTTAAAAAGACCATATTTATGCTTAGCATGAGGTATCTGCACAATGCCCAAGCTTTCTCAGATATTTCCTTGGTGCAATTAGCAGAGGAAAC AATCATTTCATGATTTTGTGCGCGGGAAAAATTCATCTAGTAGAGTAGTAGTATATCTCCAATGAGATCGATAACACTTTCTGTATAAAAATAATGTTTC TACATCTTTTTTATGAATTACTTGATTAAATCTCA
• Tissue: pods
• Gene name: LI_gene_160247;
• Additional information: details;

Expression of Ll_transcript_439773

FPKM

• PAB: 15.7
• PNAB: 11.3
• PS1: 7.5
• PS2: 4
• PS3: 7.8
• PW1: 15.2
• PW2: 21.9
• PW3: 16.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_439773

• Blastp: Thylakoid lumenal protein TL20.3, chloroplastic from Arabidopsis with 81.36% of identity
• Blastx: Thylakoid lumenal protein TL20.3, chloroplastic from Arabidopsis with 81.36% of identity
• Eggnog: pathogenesis(COG1357)
• Kegg: Link to kegg annotations (AT1G12250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424468.1)
• Pfam: Pentapeptide repeats (8 copies) (PF00805.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;