| Id Trinity | TRINITY_DN48350_c1_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_438288 |
| Sequence | TTCTTCATCTTCATCTTCATCTTCATCATTTCATAAGGATTCAATCAGAGCCATTCGTTTCAGTGCAAATGGAAATCTCTTTGTTTCTGCCGGTGATGAT AAGACTCTCAAAATTTGGTCATCAATCTCTTGGCGCTGCATCTTTACTCTGTCCTCTGAAAAGAGAATCAGTGCAGTTGCCATAAGCAACGATGAATCTT GTGTCTGTTTTGCTGACAAATTTGGGGTTGTTTGGGTTGTGGATATCACCGGCTTTGATGCCAATCAACCATTACTTGATAAGAAACCTACACCCCTTCT TTCTCACTACTGCAGTATCATCACTAGCTTGGAATTTTCCCCAGACGACCGGTTTATTTTGAGTGCTGATCGAGATTTTAAAATTCGAGTTACTAATTTT CCTAAGAAGCCATTAGATGGAGCTCATGAGATACAAAGTTTCTGTCTTGGTCATACAGAGTTTGTCTCTTCCCTTGCTTTTTTTCAAGCTCAGGAATACC AGCATCACCTTCTTTCTGGCAGTGGTGATTCAACAGTCAGTATTCATGCATGCTCTTTATTTTTATTTTTTTATTTTGTTCTAATTAAAAGTAATATGAA TTGCTTTCTTCAGGTTCGTTTATGGGATGTCTCATCTGGAGCACTCCTAGATACTTGTGACGTTGCTAATAAGGCAGGACTTTTAGAGTCTAATGGTAAT GGTAAATCAGAGGAGCATGGGCATGCTGTAACTGATTTATGCACCACCCTGGATGGTTTGCTTGTTGCAGTGGCTATTCAAGGCTTGCAAGGAATAGCAT TGTTGAGCTGCAATGTTTCTGCACAGACACTTACCCTTGCCAAGGTGAGCGCTTTGGTAACACATGCTTCAAATGACCATTGACTTGCATCATTACTGCC ATATTAAGTTATCTCTTGGAATCTACTTTTCAAGTCTGAATTTATATTTTTGATTCAATTTATGTACTATTACTTTTGATTTGGTCCTCACCGTTTATTG TTGTTTGAATTAAAGTGCAGTGCCAAATTGAAAAAGAGCGCATGTGACAATCATTTTTAATTTGGTCCCTATACCTCAATTCCAAATAAAAGTGTTAATA CTGTTATAATAACAATAACGACAAGGACCAAATTGAAGATGATTGTCTATATAAGGACTGGGTTGACAATATTTATGCAAAGGGTTTGTGTTAAAATGTG CCTCACATATAGGAGGAGCTTTACCCGAAGTACAGTTTAGCCTATTTTTAGAGGCAGGCAGGCATTTAAACTGATTGGAATGTTGCAGGTAGTTTCTATT GAAGGAGAGGCCTTTGTCCCTACCTGCTTGGGGTATGCTGCCTCTGCTAGGGAATTGTGGATAGTTACAGGTGTCTCTAGTTTACCTGGTTGTAGTCACC CTTCTTTTGCTCGGGTCCGAGTAATTTCCGGTATAGATATTGAGCAAGAGGCAGTTGTTCTCGGAGATGACAAGATGCCCGGGGGAGAAAAGCTGCTAGA AACATTGCAGGGAACCGCATCAGTAGATGAGAATGCATTTTTGGCAGCAGCTGAAGCTGTCAAAACAGCAATGTGCAACCTATTAATAAAAAAGCAATAC ACTTCAGAGAGTAGAGAATCTAGGAAGAAAACCAGGAATGATAGAAAACTGAAGCAGTAACAAGTTTGTTTTCTATTTTTTGTCTTAACATATATGGAGA TGCTATGCTTGGTTTTCATTAATACAAAATTAGTGTTTCTTAGTTATTTATTTCTCTTTTACACATGACCACATAGATGCTGTAACAAAATTCATGTTGG GCATAGTATTTGCAAGTTTTTTTGAAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_160272; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_438288
| Blastp | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 from Danio with 31.05% of identity |
|---|---|
| Blastx | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 from Danio with 31.58% of identity |
| Eggnog | Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational change of the catalytic subunit(ENOG4111WRP) |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000374) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454426.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |