Ll_transcript_438289

• Id Trinity: TRINITY_DN48350_c1_g2_i3
• Name Transcript: Ll_transcript_438289
• Sequence: TTCTTCATCTTCATCTTCATCTTCATCATTTCATAAGGATTCAATCAGAGCCATTCGTTTCAGTGCAAATGGAAATCTCTTTGTTTCTGCCGGTGATGAT AAGACTCTCAAAATTTGGTCATCAATCTCTTGGCGCTGCATCTTTACTCTGTCCTCTGAAAAGAGAATCAGTGCAGTTGCCATAAGCAACGATGAATCTT GTGTCTGTTTTGCTGACAAATTTGGGGTTGTTTGGGTTGTGGATATCACCGGCTTTGATGCCAATCAACCATTACTTGATAAGAAACCTACACCCCTTCT TTCTCACTACTGCAGTATCATCACTAGCTTGGAATTTTCCCCAGACGACCGGTTTATTTTGAGTGCTGATCGAGATTTTAAAATTCGAGTTACTAATTTT CCTAAGAAGCCATTAGATGGAGCTCATGAGATACAAAGTTTCTGTCTTGGTCATACAGAGTTTGTCTCTTCCCTTGCTTTTTTTCAAGCTCAGGAATACC AGCATCACCTTCTTTCTGGCAGTGGTGATTCAACAGTTCGTTTATGGGATGTCTCATCTGGAGCACTCCTAGATACTTGTGACGTTGCTAATAAGGCAGG ACTTTTAGAGTCTAATGGTAATGGTAAATCAGAGGAGCATGGGCATGCTGTAACTGATTTATGCACCACCCTGGATGGTTTGCTTGTTGCAGTGGCTATT CAAGGCTTGCAAGGAATAGCATTGTTGAGCTGCAATGTTTCTGCACAGACACTTACCCTTGCCAAGGTGAGCGCTTTGGTAACACATGCTTCAAATGACC ATTGACTTGCATCATTACTGCCATATTAAGTTATCTCTTGGAATCTACTTTTCAAGTCTGAATTTATATTTTTGATTCAATTTATGTACTATTACTTTTG ATTTGGTCCTCACCGTTTATTGTTGTTTGAATTAAAGTGCAGTGCCAAATTGAAAAAGAGCGCATGTGACAATCATTTTTAATTTGGTCCCTATACCTCA ATTCCAAATAAAAGTGTTAATACTGTTATAATAACAATAACGACAAGGACCAAATTGAAGATGATTGTCTATATAAGGACTGGGTTGACAATATTTATGC AAAGGGTTTGTGTTAAAATGTGCCTCACATATAGGAGGAGCTTTACCCGAAGTACAGTTTAGCCTATTTTTAGAGGCAGGCAGGCATTTAAACTGATTGG AATGTTGCAGGTAGTTTCTATTGAAGGAGAGGCCTTTGTCCCTACCTGCTTGGGGTATGCTGCCTCTGCTAGGGAATTGTGGATAGTTACAGGTGTCTCT AGTTTACCTGGTTGTAGTCACCCTTCTTTTGCTCGGGTCCGAGTAATTTCCGGTATAGATATTGAGCAAGAGGCAGTTGTTCTCGGAGATGACAAGATGC CCGGGGGAGAAAAGCTGCTAGAAACATTGCAGGGAACCGCATCAGTAGATGAGAATGCATTTTTGGCAGCAGCTGAAGCTGTCAAAACAGCAATGTGCAA CCTATTAATAAAAAAGCAATACACTTCAGAGAGTAGAGAATCTAGGAAGAAAACCAGGAATGATAGAAAACTGAAGCAGTAACAAGTTTGTTTTCTATTT TTTGTCTTAACATATATGGAGATGCTATGCTTGGTTTTCATTAATACAAAATTAGTGTTTCTTAGTTATTTATTTCTCTTTTACACATGACCACATAGAT GCTGTAACAAAATTCATGTTGGGCATAGTATTTGCAAGTTTTTTTGAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_160272;
• Additional information: details;

Expression of Ll_transcript_438289

FPKM

• PAB: 0.1
• PNAB: 0.8
• PS1: 0.5
• PS2: 0.8
• PS3: 1
• PW1: 0
• PW2: 0.2
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_438289

• Blastp: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 from Danio with 34.26% of identity
• Blastx: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 from Danio with 35% of identity
• Eggnog: Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational change of the catalytic subunit(ENOG4111WRP)
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0000374)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454426.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;