Id Trinity | TRINITY_DN48353_c0_g4_i7 |
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Name Transcript | Ll_transcript_440061 |
Sequence | CCACCAAGACAAAAATAAAATAAAAAAACTCATGTGAATGTGACCATGGAAGCAAAGCCTCTTAGAAGTGTTCCCTCTTCACACAACACTATCTATGGTT TCTTTTAACACAACATGTGAAGGAAGTGGACCCTATAAGAAGAAGAAAAGTGTTGTTGTTGTTGGTGTTGGTGATGATGAAGAGAAAAAAAGGGTTCTTG ATTTTGTGGTGAATGGTGCTATAAATAACAACACTTTGATTCAAACACCATGTTATTACAACAAGTGCTGTCTTTTTAGTGAGACTCAAAGGGGATACAG AAGCCAGAGTTTTGATTTCGGGAGCATGATGGATCCGGAACCTCGTAGATGCCGAAGAACTGATGGAAAGAAATGGAGGTGCAGTAGAAATGTAGTGCCT GATCAGAAGTACTGTGAAAGGCACATGCATAGAGGTTGTAACCGTTCAAGAAAGCATGTGGAAGCATCTCAAGTTAACTCTCAATTGACAACTAAGCCTT CTTCCGAAAAGATACAAACCAAACTAACCTCATCAAACATAGAATCTTCGGTTTCAAATCCGAACCTTTTAGGCACTCAACCATTTGACAGATCTGCATT TACCCTCTCAATGAGCGAATGTGTTGTTAATACCTCTTCGGCTAATACTAGATTGAAGAATATCATAAGTTCCGCTGATTACCGTGGCTCCTTTTCTACT GCCACTGCAAAAGCCCCTAAGGCGACCTCTTTCAGTAACACGACTTTAGTTGCTTCAGGTAACGGAAGTAGCCAAAATATATGCAAGAAAGATAACCAGA GCCAGAGCTGTATCGGCTACAACGTCGGTGTTAAGAGTGGTGCGAAAGCAAGCATCAACTGTGATGATAATAGCATCTCTACTGGAATAGGCTTCTCGCC TAGGAGTGTTCTTCAGGGTAATAATATTATTGGTGAGGCTGCAACAATTTATGATTTAATGTCTTTTATAGAACTAGAGGATTAAAGACGATTCAACCCT CTTCCTTTCCCGACCCCACCAAAACAACAAACTCTAAAGTTCCGTTTGCGAGTTAAGTTTTGGAGGGGAAAGAAAGGGAAATGGATGGCTTCGAAGTCAT CTCACAGGTGTATTTCATGGCTCCCCAAGCCTTCTTTTTTCCTTCATTCCCCTCTAAAGTTCAATTCGCAAACAGACCCTAAAACTATCAAACCTTTGTC ATTAAGTTTAGTGTCATGTATCTAATTTTATGAAGGCCGATGAACCTCCAACATTTCTTGGTAGTTTACCATGGTCCAATCCCTTCCTACAAACACAAGA AGGTTAATACTTAATAGTAACTTCGTAAGTATGTTCTGCATTGTTTACTCTGATGTGATATTAGTGTAGTATAATAATTACGATCCATTTTCTCGATGGA ATTCTCCGAATATCCCTCGTCAATTGCATGCACATTGCTCATTGTCATACATGTTGGTCTCTTGTATAGATTTATGTCTTCTAGATGCATTTTTGCTATA GCATTTGAGAATAGCTTTATTCATCCCATTTTAAGATTACGTTCAAAGAAGCCGACTCCTCTACTTTGAATCAACTGTTAGGAGAGGATACAAACAAAAT ATTAGTTCTCAAGTGGAGTTACCGTTTGATGTAAGAAATTGCATCGGCTGCGTAAGAAACGTGGATACGGTGTGTAAACAAAGTATGATTGACTACATTT ATATATATAAACTCAACACTTCCTATACCTCTGCTTGTTGAATTTCATCACTTCTGTTGAGTTAATAAATGTTAGTTTGCAAGGTCTCTTTGCATATTAA CCAAACTTGTCTGCTAGGTTGAACTTTTCATCGAAAAGCTAATGTTGCTTTGTTGTGTTTTTCGCTATCATTTCAGTTTCGGGTTGCAATAATTCGTACC TCAATGACAGAAACAATGTGGACCTTGAATCAGGTAGATGTCGAAGAACAGATGGTAAGAAGTGGCGGTGCAAGAGTGCTGTTGTTCCTGGCCAGAAATA TTGTGCAAGTCATATGCACAGAGGTTCTAAAAGGCGATTTGCCGAACAAAAACCAGACGCAACTGATTCTGCTGTTACCATTGCTCAGTTGCCTTGCTCT ACAGCCGCTACCAACATCCCGAAAGCGTATTGTTCAATTGCGAATACAAATCTGTCCATGCCAATCCCAGCAAGTACAGCACCCTTGATAAAATGTAATG AGAAAAGTCCTTGCAGCAGCGACACGGAAACCACCATCACCGACACCATGAATGAATATAGCTATGCTTCTTCATAAGAAGATTTTTCATTTCTTGAAAC ATGTTTGATGTTAACATGAACAAGTTAGCTTCTAAGTTTTTTTTAGATCAGCTTTGTGTAAATTGAACAATGCCCTCTATGAAGAAAACACTATTTAGGC CTTCTAAGTTTTGAACATTTGGTCTTCACAATATGTTGTGTTCAATTCATATCGTCTACCGCAGTTGAGATTAAGACTTGATTGTTGTTGGCAGATTGAC CTGTATTATGTCCGGGGGAAAATGGATTTGACCAAATTTTAACCGGAGACTTTCGTTGTGGGCTAGATTGATAGATACGAAGTTTTTTTTTTACTATACG GGACATCAATGTTTTGTTAATGAACATGATTTGATCCACGT BLAST |
Tissue | pods |
Gene name | LI_gene_160311; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_440061
Blastp | Growth-regulating factor 12 from Oryza sativa with 56.63% of identity |
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Blastx | Growth-regulating factor 12 from Oryza sativa with 56.63% of identity |
Eggnog | growth regulating factor protein(ENOG410YJFR) |
Kegg | Link to kegg annotations (4336731) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443759.1) |
Pfam | WRC (PF08879.9) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |