| Id Trinity | TRINITY_DN48353_c0_g4_i8 |
|---|---|
| Name Transcript | Ll_transcript_440062 |
| Sequence | CCACCAAGACAAAAATAAAATAAAAAAACTCATGTGAATGTGACCATGGAAGCAAAGCCTCTTAGAAGTGTTCCCTCTTCACACAACACTATCTATGGTT TCTTTTAACACAACATGTGAAGGAAGTGGACCCTATAAGAAGAAGAAAAGTGTTGTTGTTGTTGGTGTTGGTGATGATGAAGAGAAAAAAAGGGTTCTTG ATTTTGTGGTGAATGGTGCTATAAATAACAACACTTTGATTCAAACACCATGTTATTACAACAAGTGCTGTCTTTTTAGTGAGACTCAAAGGGGATACAG AAGCCAGAGTTTTGATTTCGGGAGCATGATGGATCCGGAACCTCGTAGATGCCGAAGAACTGATGGAAAGAAATGGAGGTGCAGTAGAAATGTAGTGCCT GATCAGAAGTACTGTGAAAGGCACATGCATAGAGGTTGTAACCGTTCAAGAAAGCATGTGGAAGCATCTCAAGTTAACTCTCAATTGACAACTAAGCCTT CTTCCGAAAAGATACAAACCAAACTAACCTCATCAAACATAGAATCTTCGGTTTCAAATCCGAACCTTTTAGGCACTCAACCATTTGACAGATCTGCATT TACCCTCTCAATGAGCGAATGTGTTGTTAATACCTCTTCGGCTAATACTAGATTGAAGAATATCATAAGTTCCGCTGATTACCGTGGCTCCTTTTCTACT GCCACTGCAAAAGCCCCTAAGGCGACCTCTTTCAGTAACACGACTTTAGTTGCTTCAGGTAACGGAAGTAGCCAAAATATATGCAAGAAAGATAACCAGA GCCAGAGCTGTATCGGCTACAACGTCGGTGTTAAGAGTGGTGCGAAAGCAAGCATCAACTGTGATGATAATAGCATCTCTACTGGAATAGGCTTCTCGCC TAGGAGTGTTCTTCAGGGTAATAATATTATTGTTTCGGGTTGCAATAATTCGTACCTCAATGACAGAAACAATGTGGACCTTGAATCAGGTAGATGTCGA AGAACAGATGGTAAGAAGTGGCGGTGCAAGAGTGCTGTTGTTCCTGGCCAGAAATATTGTGCAAGTCATATGCACAGAGGTTCTAAAAGGCGATTTGCCG AACAAAAACCAGACGCAACTGATTCTGCTGTTACCATTGCTCAGTTGCCTTGCTCTACAGCCGCTACCAACATCCCGAAAGCGTATTGTTCAATTGCGAA TACAAATCTGTCCATGCCAATCCCAGCAAGTACAGCACCCTTGATAAAATGTAATGAGAAAAGTCCTTGCAGCAGCGACACGGAAACCACCATCACCGAC ACCATGAATGAATATAGCTATGCTTCTTCATAAGAAGATTTTTCATTTCTTGAAACATGTTTGATGTTAACATGAACAAGTTAGCTTCTAAGTTTTTTTT AGATCAGCTTTGTGTAAATTGAACAATGCCCTCTATGAAGAAAACACTATTTAGGCCTTCTAAGTTTTGAACATTTGGTCTTCACAATATGTTGTGTTCA ATTCATATCGTCTACCGCAGTTGAGATTAAGACTTGATTGTTGTTGGCAGATTGACCTGTATTATGTCCGGGGGAAAATGGATTTGACCAAATTTTAACC GGAGACTTTCGTTGTGGGCTAGATTGATAGATACGAAGTTTTTTTTTTACTATACGGGACATCAATGTTTTGTTAATGAACATGATTTGATCCACGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_160311; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_440062
| Blastp | Growth-regulating factor 9 from Arabidopsis with 34.64% of identity |
|---|---|
| Blastx | Growth-regulating factor 12 from Oryza sativa with 56.63% of identity |
| Eggnog | WRC(ENOG4111AY1) |
| Kegg | Link to kegg annotations (AT2G45480) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443759.1) |
| Pfam | WRC (PF08879.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |