| Id Trinity | TRINITY_DN48353_c0_g5_i6 |
|---|---|
| Name Transcript | Ll_transcript_440056 |
| Sequence | AAAAGGAAAAAAAATAGAAGCTAAAGAATCTGAATTTATGAGACCCACCCTGTGACTTTAGAGTCCTTGGTGTGCATCTATCATTTTCTCCATTTCCAAA ATGGAAAAAAGGGTCAAATAGTAAGTGGGGGGTTCTGAGCCTCTGAGGTAAAGGAACAGAAAAAGTAAATAGGTTAGTAGCAGTAAAAGCTGAAACCGTA CAATCTTCTCAGACAAGCATTTGCTTCAGATACCAACTCTTCAAAATACTATAGTATACAATAATACCAATAATAACTATTTCCTCTTTTGTATTTAGGA CCCTCTTCTTTCTCTCTCCTCTTAGTTTATGGATTTCAGTAAAGATGTCAGAAACAAGAGCTGCCAGAAAAACAGGTTATTTGCAGAAGCAGAAGCAGAA GCAGGTAGCAACAGAGAAGTGTGCAGTCACAACCATAGCAGCAAAAGAGAGATAGAGAGAGAAAGAGATAGTGCTTTGGTATGCAACACTGTAATAATCA GAACCATTAGTTGTTTATCAATGTACAGAAGATTCTGTAGCTCAATGGTCCCTGAAATAAATATACCTACTCTACTCCTCCATGGCTTATAAAGTAAAAT AACCTAAACCTACCATAATCACTACACACCCTCCTCCTTTTCACTGCACTCAACAAGTTCTGTTTCATTTGTTATTGTTTTTCTGTCTTTTTTGTTGATG ATGAATAGAAGGAACAAGTTCCCATTTACCCCATCTCAGTGGCAAGAGCTTGAACATCAAGCTCTTATCTACAAGTACATTGCTTCAGGTATTTCCATTC CACCTGATCTAATCTTCACCATCAAAAGAACCTACTTGGATTCTCCTCTTTCTTCAAGGCTTTTGCCTCACCACCCTCAACACTGTAAGTCAATATTAAC TCCTATTTCAGTAGTATTACTAAATAGTCACTACAATACTGTTGAAGGAATCAGATTTTTAGTGAAAAAAACAAAACTAGATTAAAAAAATATCTACTGT GCTTAGCATTTTCATTTGGTTATTCTTGATTGAAAAGTTTGAGTGAAAAAAAGGTTTTTTTTTTGGGTGAGTGCAGTTCGGTGGAACTATTTGCCAATGG GTTTGGGAAGAAAAATAGACCCAGAGCCAGGTAGGTGCAGAAGAACAGATGGGAAGAAATGGAGGTGCTCAAAAGAGGCTTATCCAGATTCAAAGTACTG TGAGAGACACATGCATAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACAAATGACACTAATGCTTCTTCAACAACACCCTCCTCA ATCTTATCAATCACCAAAAACAACACTGCACTAACCCCAACAACCACTCATGACTCTTACCACCATCACCCTCATCAACATTCCTCTTCTTCCTATGCTG CTTCTCATCCTCAGCAACACTCTTTCCTCTACCATCATCCCCCACCTTCAAGACCCTCTTCCAATGGTTTGTCTTTTCAAGACAATAACAGTGCTTCCAT GTTTCCTGATAATGCTTCTTGCTCTCAAAACAACACTGAATCCAGGAATAGGTATATTTATGGACTGAAAGAAGAGGTTGATGAGCATGCTTTCTTCACT GAACCTTCTGGGAATATGAGAAGCTTCTCTGCTTCCTCTATGGATGATTCTTGGAACCTAACACCACTCACTATAAGTTCCTCATCCTCTTCAAAACAGA GGAACTTCTCTGGTTTAACAAATGACAACAATGAGTACTCTTACTTGCAACTTCAGGGCCTCAGTGACAATGCAAAACAACAATCTGAGCAAGATCAGGG TTGCTATAATGATATCAAATGTGAAAATATCATGAAACTTGGTGACAGAGAAGAACAACAACCTCAGCAGAAAACTGTTCATCGTTTCTTTGATGAATGG CCTCCCAAAAGAAGAGGCTTGTGGCTTGATTTGGATGATAAATCTTCAACAACTCAACTTTCAATTTCCATTCCTACTTCTAATGATTTTGCAACTTTCA GTTCCAGAAACCAACGAGATGATTGAATTTAGCTTTCAATAATGGGTTCCTCTAAGCTGAAACTAAGGTCAATAATGTACTTATTACATGGAGTTTCATA ACTTCATATTTTGTGTTGTCTCCCTTTTAGTTGCACCTGTTTTTCCATATTTTGTAAAACTTATATGGATGGATCCAATGTCTAGTGCTGTGTTTGTTTG TTATTGCTTTTGTTTGTTCTGTACCAAACATAGTTTGAGCTAAACTTAGATGGGCACATATGTATTTGTTCATTCATCCTTTCCTTGAATCTAGTACTTA GTTTTGTCATTTTTTAACACCAAAGCTTAAACCAAATCAAACTTCATTCATTACCAATTTTACTATTTTACTAATAAGTTAGTATCTTCTCCCAAATTGT GTCACAAATCTATAATTCGGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_160312; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_440056
| Blastp | Growth-regulating factor 5 from Oryza sativa with 37.33% of identity |
|---|---|
| Blastx | Growth-regulating factor 1 from Oryza sativa with 44.69% of identity |
| Eggnog | growth-regulating factor(ENOG410YFT7) |
| Kegg | Link to kegg annotations (4339928) |
| CantataDB | - |
| Mirbase | osa-MIR396h (MI0013048) |
| Ncbi protein | Link to NCBI protein (XP_019464482.1) |
| Pfam | WRC (PF08879.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |