Ll_transcript_440064

• Id Trinity: TRINITY_DN48353_c0_g5_i9
• Name Transcript: Ll_transcript_440064
• Sequence: CTTTTCCTTTTTTTTAATTTTTTTTCTAATGTCTATTTTAAATGTGAGAGATAATAAATACTGATGCATGTGATATGAAATTTGTCAGTGTTTTCTGGAT CTTGACTCCACCTCATAGAGTTGTTAAGTTTAACTCGTGAGCCAGCTTATCTTATTGCTAAATACTTTGTTTACCGTTGTTATATCCCCTTTTAAGTGTC TAGCTTAGAAGTTAGAAACCCATTTTCTCCAATCTTTGATAAAACAGAAAAAGGTGGTATATTTAAGCATGTGAGGGATGTTTCATTTTGAGTACGGATC TTGATAAAATTTAATGTTTTTCGTTTGGTGTTTCTATATGATTGATTTTCAACTTCCAGGGTAAGCAAAGGATCAAGTCCCTAAAATGCTGTCACTGAAC AAAGGTTACACTGTCTGAACACTAAACACTTTCAACTTTTAAGTACAAGATCTGAATTAGTACTTGGATTAACAAAATACCCAACTTGTTTTTCATTGGA ACTAGCAAAAGGACCACACAAAATAACCCCAGTTAAATAATATTCAACATTCATGCATACAAGGATTTTATTTTATTTCATTTTATATAATCCACTTTCA TTGTGATAAGAACAAAAGAAAAAAAAATATTTTTTACAGGGAAAAGATTCCATTTTTATGAGACCCTCCCTATGACTTTAGGGTCCCTGGTGTGCATCTA TCATTTTCTGCATTTCCCAAATGGAAAAAGGGTCAAATAGTAAGTGGGGGGTTCTGAGCCTCTGAGGTAAAGGAACAGAAAAAGTAAATAGGGTTAGTAG CAGTAAAAGCTGAAACCGTACAATCTTCTCAGACAAGCATTGGCTTCAAACACCAACTCTTGAAATAGTCTAGTATACAATAATACCAATAATAACTATT TCCTCTTTTGTCTTTAGGACCCTTTTTTCTTTCTCTCTCTTCTTAGTTTATGGATTTCCGTAAAGATGTCAGAGACAATAGCTGCCAGAGTAGCAGCTTA TTTGCAGAAGCAGTAGCAGCTAGCAACAGAGAGGTGTGCAGTCACAAACATAGCAGAGCAGAGAGAGAAAGAAAATAAAGATAGTGCCTTGGTATGCAAC ACTGTAATAATAATCAGAACCATTATTTGTTTATCAATGTACAGAAGATTCTGTAGCTCAATGGTCCCTGAAATAAATATACCTACTCTACTTCTCCTCA TCCTCCAAGGCTTGAAGTAAAATAATAACCTAACATAATAATCACTCCCTTCACTGCACTCACCAAGTTTTGTTTCATTTGTTTTGTTTTTCCTGTTTTT ATCACTCTCTTCTGGTTGATGATGAATGGAAGGAACAGTTTCCCTTTTACTCCATCCCAGTGGCAAGAACTTGAACATCAAGCTCTTATCTATAAGCACA TGGCTTCAGGTGTTTCCATTCCACCTGATCTAATCTTCACCATCAAAAGAAGCTACTTGGACTCTCCTCTTTCTTCAAGGCTTTTGCCTCACCAGCCTCA ACACTTTGGGTGGAACTACTTGCAAATGGGTTTGGGAAGAAAAATAGACCCAGAGCCAGGTAGGTGCAGAAGAACAGATGGGAAGAAATGGAGGTGCTCA AAAGAGGCCTACCCAGATTCAAAGTACTGTGAAAGGCACATGCATAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACAAATGACA CTAATGCTTCTTCAACAACACCCTCCTCAATCTTATCAATCACCAAAAACAACACTGCACTAACCCCAACAACCACTCATGACTCTTACCACCATCACCC TCATCAACATTCCTCTTCTTCCTATGCTGCTTCTCATCCTCAGCAACACTCTTTCCTCTACCATCATCCCCCACCTTCAAGACCCTCTTCCAATGGTTTG TCTTTTCAAGACAATAACAGTGCTTCCATGTTTCCTGATAATGCTTCTTGCTCTCAAAACAACACTGAATCCAGGAATAGGTATATTTATGGACTGAAAG AAGAGGTTGATGAGCATGCTTTCTTCACTGAACCTTCTGGGAATATGAGAAGCTTCTCTGCTTCCTCTATGGATGATTCTTGGAACCTAACACCACTCAC TATAAGTTCCTCATCCTCTTCAAAACAGAGGAACTTCTCTGGTTTAACAAATGACAACAATGAGTACTCTTACTTGCAACTTCAGGGCCTCAGTGACAAT GCAAAACAACAATCTGAGCAAGATCAGGGTTGCTATAATGATATCAAATGTGAAAATATCATGAAACTTGGTGACAGAGAAGAACAACAACCTCAGCAGA AAACTGTTCATCGTTTCTTTGATGAATGGCCTCCCAAAAGAAGAGGCTTGTGGCTTGATTTGGATGATAAATCTTCAACAACTCAACTTTCAATTTCCAT TCCTACTTCTAATGATTTTGCAACTTTCAGTTCCAGAAACCAACGAGATGATTGAATTTAGCTTTCAATAATGGGTTCCTCTAAGCTGAAACTAAGGTCA ATAATGTACTTATTACATGGAGTTTCATAACTTCATATTTTGTGTTGTCTCCCTTTTAGTTGCACCTGTTTTTCCATATTTTGTAAAACTTATATGGATG GATCCAATGTCTAGTGCTGTGTTTGTTTGTTATTGCTTTTGTTTGTTCTGTACCAAACATAGTTTGAGCTAAACTTAGATGGGCACATATGTATTTGTTC ATTCATCCTTTCCTTGAATCTAGTACTTAGTTTTGTCATTTTTTAACACCAAAGCTTAAACCAAATCAAACTTCATTCATTACCAATTTTACTATTTTAC TAATAAGTTAGTATCTTCTCCCAAATTGTGTCACAAATCTATAATTCGG
• Tissue: pods
• Gene name: LI_gene_160312;
• Additional information: details;

Expression of Ll_transcript_440064

FPKM

• PAB: 0.4
• PNAB: 3
• PS1: 3.6
• PS2: 3.4
• PS3: 2.5
• PW1: 0.7
• PW2: 0.8
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_440064

• Blastp: Growth-regulating factor 1 from Oryza sativa with 38.22% of identity
• Blastx: Growth-regulating factor 5 from Arabidopsis with 74.11% of identity
• Eggnog: growth-regulating factor(ENOG410YGVC)
• Kegg: -
• CantataDB: -
• Mirbase: osa-MIR396h (MI0013048)
• Ncbi protein: Link to NCBI protein (XP_019443197.1)
• Pfam: QLQ (PF08880.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;