Id Trinity | TRINITY_DN48358_c2_g3_i5 |
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Name Transcript | Ll_transcript_438986 |
Sequence | TTTCTTTTTTTGAGAGAGAGAGAGAGATCTTGCTCTATGATCCAGGCTGAAGAGGGCAGTGGCACATTCTCTTCTTTTCTTTCTTTCTTTCTTTATATCT TTCTTTCCCTCTCAATTATTTCTATTTCTATTTCTATTACTTCAACTCTTATTATATTTATTTATATCTATCTTTTTTCCTTTTATTATTCTCTTCGCTC TCTCAATATCTTCATTCTTGTTTCAGTCGCCGAATCTGTTTCTGCGCTTTAGGGTTTCCGACCTCTCTTCACAACAATGCCTTTCTCCATCACGTCACCG CTCTCCGTCAATTCCTCGCCGCCGATACTCCCACGAACACCGACACCGTCCAGGTCGCCGTCCCCAAGCTCTTACCACCACCGCATCCACCGCATCCGGC ACCGGATGGAGCTCCACCTTGCGCTCATGCTTTTCACGAGTCCGCATCGGTGAAAGCGAAACGTCTCGCTCTACAGCGAAAAGGCGCCGCCGCTATGCTT GCTGCTGAGGAGTTTGCTCGCCAGTTAGAGTCCGGTGGCGGTGAACTTGCCGATACATTGGGAAATATTAATGGAGAAGAACTGGCCCAGAGTAACATGA AAGTTTTTTGTCGAATGTGCAATCGGGTTGAAAATGATGGAAGCGAGACAGCAAAAAAGATGCTATCATGTAAAAGTTGTAGTAAGAAATACCATAGGAA CTGCTTGAGAAGTTGGGCTCATAATAGAGATTTATTTCATTGGAGTTCATGGACCTGTCGCGCTTGCCGAATTTGTGAGGCTTGCAGAAGGACCGGTGAT CCAAGCAAGTTCATGTTTTGCAAAAGGTGTGATGGCGCTTACCATTGTTATTGTCTTCAACCACCTCACAAGAATGTTAGTACGGGGCCCTATTTGTGCC CAAAGCATACAAGGTGTCACAGTTGTGGATCGAATGTCCCTGGAAATGGACTGAGTGTGAGGTGGTTTCTTGGATACACCTGCTGTGATGCATGTGGAAG ATTGTTTGTGAAAGGAAACTACTGCCCTGTTTGTTTGAAGGTTTACAGAGATTCAGAGTCGACACCAATGGTTTGCTGTGATGTTTGCCAGCGCTGGGTG CATATACATTGTGATAATATTAGTGATGAAAAATATCATCAATTTCAAGTGGATGGGAATCTGCAGTATAAATGTCCCACATGTCGTGGGGAATGTCATC AGGTCCAGGGTCTCGATGAAGCAGTTCAAGAGCTTTGGAGGAGAAGGAATATTGACGATAGAGATTTAATTGCCAGCTTGAGGGCTGCAGCTGGTTTACC AACTCAAGACGAAATATTTTCTATTTCACCATTTTCAGACGATGAGGATATTCGCAAGCCTTTAAAATTAAAGAGTGATTCTGGGCGTTCCTTAAATTTC TCTCTAAAGAATTTGTCCAATCACACACCAAAGAAGAAGGATTATGGAAAGAAATCTTCAAGCAAAAAGATTGCTAAGAAAAAGGACTCTCAGTCATTTG TGTCTGGTAAAATTGACACACGCCATAGTTTTGAAGGGCATAGTGATACCAGATCCTTACATAGTTTGGACGATGATGATATACAATCCCTGAGAAATGA TGGTCATGGTGTTTATTCATCACCTGCTCCTGCCAATCAGCCAGGGATTTCAAAACATAAATTTGTTGATGACCTGATGGTCAGTGATGAAGAGAGGAGG CCCAGTGTTGTTCGAATTAAAAGCAATAAGGCACATATTATGAATGGTGAAGAGGAGAATGAAAAACATGATGATAAAACTCAGAATGTGAAAGGGAAGA AGTTGGTTATAAATTTGGGTGCACGGAAAATTAATGTAGCTAGTTCTCCGCGGTCTGATACTTCAAGCTACCAAAAAGATCAAGATCTGGTTAATGTTAA TGGAAATGAATACATAAGCCAGTTGAGGAAGGGAGACAAGTTTGCATTAGACAGACAAGGTGCCGCAGCTAGACATATTGATGGTAAAGGAAGCAGAATT GACTCTGGCCAAGCAAAGTTTTCAAGTAGAGGGAATATTTCTGATGGAAGTTTAGAGCGTACTCATGCCTTGCGGAGCAAATATAGTACTGATGGAATAT TTGGTCAAGTAGGAACAGTGAAAGCTACTTCAAGAGGTGAAGGAAAGTATGTGGAGAGAGATGGAAATAATAGCAATAATCTTGCACCTTCACATTATTT GCCGAAAGATTCTAAACCTCTACTGAGATTTAAGTTGAAGAAACCTAGCATTGAAAGTCTAAATTCTGCTCATCAGGAGGAGAAGACTATAATCAAGGGC CAGAGATCGAAAAGGAAGAGACCAACACCTTCTAAGGAGAAAATGTTGTTTAATGAGGCTGAAAATGTAAGCCAATCACATCAAGACAGTCAAATGGATG AGATCATGACTGCAAACTGGATATTGATGAAATTGGGTAATGATGCAGTTGGAAAGAGAGTTGAAGTTCATCAGACATCTGACAATTCTTGGTTAGTGCC TTGCATAGCTTTATGTAAATTATGTTCAAGTAATGGGAGAAAACTATATATTAAATAATGCTATGCGTTAGGGAATGATGTATCCGTTGTTTATTATTAA CTATTTTGTTTTTAATAAAGCTTCTTCTAGCTTGTTTGTTCCTCCCCAAAAGCTTCACTTTGAAAGAACTATGCCCATGGATGAGTTCATTTTATAGATG TAG BLAST |
Tissue | pods |
Gene name | LI_gene_160360; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_438986
Blastp | Histone-lysine N-methyltransferase 2B from Homo with 31.2% of identity |
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Blastx | Histone-lysine N-methyltransferase 2B from Homo with 34.9% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (9757) |
CantataDB | Link to cantataDB annotations (CNT0001633) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019454409.1) |
Pfam | PHD-finger (PF00628.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |