Ll_transcript_439711

• Id Trinity: TRINITY_DN48361_c5_g2_i3
• Name Transcript: Ll_transcript_439711
• Sequence: CTATAGAATAATCTGAGGGTGGTGACAAGGTCTCACTTCACATTTGGGTTTGTGGGGCTAAAAACAACCAAATTAACTTTAATCTCTTCTCTGACCAGAC TCTGCCACACTCTGCAGAAGCATCAACAACCTTTACTAGGCCTAGGCCAAGGTTTTGGCTTTTATGGACCAGCAGCAGTGACAGAAATATCACAATTCAA GGCTATGAACAGGTGCATGTAAAGGGAAAAAACTAACAAGAAACTTCATTTCTCATGAAGCAAAGCAAAGTGTGTCCGTTTGAAGAAAACTTATGAGAAG TATTTTATTTCTCATCAACTGGCCCAAAGCCAAACCTTAGGTTATTGAGAGAATCTGGTTATGAGCCAACACCAATACTTAGACGGCAAAATTTCCAACC AAATTGAACAAACACAGGAAAATACTTTGAACCCAACCATAGAACATACAAAGCATAAAGGAGAAACAATGGGGATGAGGAACACTGGGGGAGAGATTGT TCAAGTAGAAGGAGGCCACATTATTCGATCCACAAATCGAAAAGATCGGCACAGCAAGGTTTACACATCAAAAGGTCCTCGCGATCGAAGGGTTAGACTC TCAGCTCATACAGCTATTGAATTCTATGATGTTCAAGACCGCCTTGGCTATGACCGACCCAGCAAGGCCGTGGACTGGCTCATCAAAAAGGCGAAGCCTT CCATCGACAAGCTTGCTGAGCTTCCTCCATGGAATCCAACTTTAGTGGAAGAGCACAATGCAAATTCAAGTGACATGAGTCACATGACTAATGCAAAACA ATCAGAGTCTTGTGGTTATAGTTTTCAGCTCCAAAGGCAACTAGGTGAGAGTGAGAACTCTGATAAGCATTCAGCATTAGCCTTCATTCAACCACACATG GATACTACTGACCCTATAGCTTTATTTCCAACGACTCCTGCAACTTCCTCTTACAATTTTCAAAGTTACCCTGCTGATATAATCTCTAGAGCCAACAATT CCACACAAGATCTTGGCCTCTCTCTTCATTCCTTCCACAACCACACTGGTCTTGTTCTTGGACAATCACAACAAGCTGCAGGAGCAAATCAAACACCTTC AAGTGAAGAACACCAAAGCCTTTTTGTTGGCTCAGCTCCAATTGGGTTTGAGAACCACTACCAGAGGATTATGGATTGGAACAACGAAGCATTCATGGTT AACTCACACCAATTTCTAGGCCAGGGTAATTCAGGATCAGCATATTCTCAAAGTGGGACCACCCTTCAGTCCAATTTTTCACCATTAGTCCGTTCTTGGA ACGACATTCCGATGAATTCCTCAGAACATCAAAGGTCCCAACATGCTTCAATCTTTGGCAGCAGGTTTCTGTCTGATCATGGATTAGCAGGGTTCAGTAT TCCGGAAGAGAATCATATTGATACCAACAACCCATCTCCTTCTCCTACGTCTCACCACTGACCCGAAACATCGCTGCAGTCTTTCATATGTATCGGGTAC GTGGCTGATAATATTAGTAAAAAGTATGTCAATCACTTCCTTGAACAGTTAAACCATCTGCAATTTGTTTCTGTATGTTAGCTTCTAGTTCAAGTAACAC TGTCAATGAGGACTAAAATATTTGCAGATCACTTTTGTATTTCTAATGTAATAGGTTTGATCACACTCACTTGGAGTTGGCATGTCATTGTTAACTAGCT TTCTGAGTTTAAGCATAGTTCATCTAATTGCATCAGACCGGGTGACTTCTAATATAGAAGTGTTAAATAAAAATTAGCTTTTTTGCATCTGGTATGGTAA TGTGGCTTTCTTCATGCACAAAACAATATCTGGGGTAGCATATAGAGCATTGAAATTTGAATGCTGATTCTAAAAGGGTACTCATGATGTTGTTACTTGA TAGAGATATCAAACCATTCGTAGGAGAGTTGTTCCTTTATAAACGTGAAGGACAGCATATAACAAACAATTGGCGCAAGCTTCTGTTATTTGTATAACTT ATGAGATAATTTGTTGTGAGAAAAAAATGTATGCCCCATAAGTTTTATATATTATTACTCCATCACTCATCATTCATGTTTAATTATTATTGATTATTCA AAAAATAATACAATGAATAATGAATGTATATAAATCTTTACATCATATATATTACACTTATTTGTTTTCTCCTCAATCTTAAATATATGACAGCTCAATA TTCCTTCATACTA
• Tissue: pods
• Gene name: LI_gene_160398;
• Additional information: details;

Expression of Ll_transcript_439711

FPKM

• PAB: 0.2
• PNAB: 0.8
• PS1: 0
• PS2: 0
• PS3: 0.7
• PW1: 0.4
• PW2: 1.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_439711

• Blastp: Transcription factor TCP4 from Arabidopsis with 37.91% of identity
• Blastx: Transcription factor TCP4 from Arabidopsis with 37.91% of identity
• Eggnog: Transcription factor(ENOG410YG88)
• Kegg: Link to kegg annotations (AT3G15030)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449056.1)
• Pfam: TCP family transcription factor (PF03634.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;