| Id Trinity | TRINITY_DN48362_c3_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_438731 |
| Sequence | GCAGAAAAGGTTACTGGCAGATTGAAATGGGAGATTTTCTCATTGGAGGTCTTTCAACAGGTGTTTGTGAGGGTGGCTGTGCTGTTATTGTGGATTCAGG AACATCTTTGCTTGCCGGTCCAACTGTATGTGGTTCAATCTTTCGGTGAAGTTTTTCCTTATAGATTTTTTGCTTAGAGGTAGAAGGCCAACAACTCTTG CCGAAAGTGCGAAACCATTAGAAATGATTTACATCCAAATGGTCTTTTGAAAGATTTGTTTTTTGACAGAACAATTGCATAGATTTTCGTTTATTATTTT TGTTGACTGTTGATTAATTCCAGCCTGTTATTGCTGAAATCAACCATGCTATCGGAGCTGAAGGAGTTCTAAGTGTAGAATGTAAGGATGTTGTTTCTCA ATATGGAGAGTTGATATGGGATCTCTTAGTATCAGGGGTAAGCTTTCTTTCCTTCTATAAAAAGCAATGTTTTAAAAACAGGGAGATTAATCTAGCAAGA CCTCCAGGTCATGGTTCAACTGCCTAAATTTATTGTTATGCCGATTTTGATAGAATCGGAGACACTGGTGGTTCATAGTCTAACCGGTTCCGGTTTTTAA AAAACTGCTATTGTGGCCCCAATCTTTACCATTTATGACCTAAATGAATATGATATTGATATCCAGGTGAAACCTGCCGACGTATGTTCGCAAGCTGGAT TATGCGCTTTCAAGAAGGGCCTATCTGAGAGCGCTGGAATTGAGATGGTAACCGAAAAGGAGACAGAGTCGAAAACTAGAGGAGATACTCCTTTGTGTTC ATCTTGTCAAATGCTTGTGATTTGGATCCAGAATCAACTAAGGCAAAAGAACACTAAGGAAAGAGTGTTCAGCTATGTGAACCAACTATGTGAGAGCCTG CCAAGTCCGGCTGGAGAGTCGGTGATAAGCTGCGATAGTCTTTCTCGGATGCCAAACATTACGTTCACTATCGGAGATAAACCTTTTGTCCTTACACCAG ACCAGTATATTCTGAGAACTGGAGAAGGCATCGCAGAAGTTTGCCTTAGTGGGTTTATTGCTCTTGATGTTCCTGCTCCACGAGGCCCACTCTGGATTCT TGGTGATGTTTTCATGAGGGTATATCACACAGTGTTTGATTATGAGAATGCCCAAGTTGGTTTTGCCATAGCTGCCTAAACTCACTTCCAAAGAAGACTC TGTATTTTAATAAGTGTTGTGTAAAGAAGCTGTTATTATAAGCTATAAATACTAATACTCAGGTTCAGTCTGTGTATTCATAAATGTATTTACTTATGCA TTTGAAAGTATAGACTTGGAAGTGTTGCATGTGTTTACATTGAAGACCCATGTTTATAATCTTCTTTGTAAACCAGTATTTATACCTTTCTTTTCCTATT ATAATTTTACTATATACTTTAAATGTGGTATACTAATGTGGGTGGCAATAGAATGCATGAACTTCATCCACTTAACTTCTATAGTCCACCAGGCTTTAAC ATGTGGTCACTTTATGTACAATATAGTTACTGAAGTGAGAACATTTCTCATATAAGGTAGTTATTGATCACATAGTAATCATGTATATATATCTTTTAAT CTTAACCATTCTATCGAGATCCAATAGTTCATATCTGTTCTCATTTCATATTATAGTGTATTGTTCTTATGTAAGTAATATATAAACACATTGTTCTTAG GTGGTGCCCTGTATATTTGTATATGTATAAACATAATATAGATATACTCACTAAAGTTTGGGATCCTTACATTAGACCCATGTTTGTGTAAGTTTGAGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_160408; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_438731
| Blastp | Aspartic proteinase oryzasin-1 from Oryza sativa with 55.56% of identity |
|---|---|
| Blastx | Aspartic proteinase from Oryza sativa with 55.56% of identity |
| Eggnog | aspartic(ENOG410XNV7) |
| Kegg | Link to kegg annotations (4339639) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419261.1) |
| Pfam | Saposin-like type B, region 1 (PF05184.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |