| Id Trinity | TRINITY_DN48362_c3_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_438734 |
| Sequence | GCAGAAAAGGTTACTGGCAGATTGAAATGGGAGATTTTCTCATTGGAGGTCTTTCAACAGGTGTTTGTGAGGGTGGCTGTGCTGTTATTGTGGATTCAGG AACATCTTTGCTTGCCGGTCCAACTCCTGTTATTGCTGAAATCAACCATGCTATCGGAGCTGAAGGAGTTCTAAGTGTAGAATGTAAGGATGTTGTTTCT CAATATGGAGAGTTGATATGGGATCTCTTAGTATCAGGGGTAAGCTTTCTTTCCTTCTATAAAAAGCAATGTTTTAAAAACAGGGAGATTAATCTAGCAA GACCTCCAGGTCATGGTTCAACTGATTAAGTTTATAGTTGCACCGTTATTGTCAGAATCACAGACACGGTGGTTCATGGTTTAGCTGCTTCAACCGACCA TTTTAGTCTAGTTTTTAAAATACTGCTATGAGTTTTCTATTCAGCATGTTTTCCGGCCCCCGATCTTTCTCATTTGCATTTCAACTCCTTGTATCTAAGT GAATTTGACCTTGATATCCAGGTAAAACCTGCTGACATATGTTCGCAAGTCGGGTTATGCTCATTCAAGAAGGATCTATCTAAGAGCGCTGGAATCGAGA TGGTGACCGAAAAGGAGCAGGCAGAGTCAAAATCTAGAGGAGATGCTCCTTTGTGTTCATCTTGTCAAATGCTTGTGATTTGGATCCAGAATCAACTAAA ACAAAAGGCAACAAAGGAAAGAGTATTCAGCTATGTGAACCAACTATGTGAGAGTCTTCCAAGTCCAGCTGGTGAGTCAGTGATAAGCTGTAATGGTCTT GCTCAGATGCCGAACATTACGTTCACTATCGGAGACAAACCTTTTGTCCTCACACCGGATCAGTATATTCTGAGAACCGGAGAAGGCGTCACGGAAGTCT GCCTTAGCGGATTCATTGCTCTTGATGTTCCTGCTCCACGCGGTCCACTCTGGATTCTTGGTGATGTTTTCATGAGGGTATATCACACTGTCTTTGACTA TGGAAATGCCCAAGTTGGTTTTGCCCTATCTGCCTAACTAACTTCCAAAAGAGACTGCATTTTAATGATTGTGTTGTAAAGAAGCTTCTATAACCTACAA CTAGTATTATTACTCAGGCTCACTCTATGTATTCACATGTGTATTTATTTATGCACTTGAAACTTGAAAGTACACACTTGGAAGTGTTGCATGTGTTTAT TAAAGACCAATGTTCATATCCTTCTGTGTTAATCTGTATTTATATTCTGTTTTCCCCCTTCTTATTTACTATAACTTTATCCATCTAGCTAGCTTCTCTC GCCGAAAATGTTCTTTTTTTTTCTTCGTATAATCAAGAGTATCCATTCACCTTTTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_160408; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_438734
| Blastp | Aspartic proteinase from Oryza sativa with 69.23% of identity |
|---|---|
| Blastx | Aspartic proteinase oryzasin-1 from Oryza sativa with 55.81% of identity |
| Eggnog | aspartic(ENOG410XNV7) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440635.1) |
| Pfam | Eukaryotic aspartyl protease (PF00026.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |