Id Trinity | TRINITY_DN48367_c4_g1_i17 |
---|---|
Name Transcript | Ll_transcript_440149 |
Sequence | TCATATTGAAGTAACCTTTGCTTATTTTTTACCCATGAATAATTCAAGAGTACAAAAACAAATTGTAACGGTAGAAACAGATGAAAAAAGAAGCGCATGG AAGAAGAAACCCAATTCTGCTGCATTTCCCACCAATTCTTCCGACTAGCCACCGCCAACCCTAACAAAATCGCCGTCATTCACGCTTCCGGCGTCGCTCA CCTTTCCAAATACCTCCGCCAAAATTCACCATCTCCCAATTTCAACCGCGACATCACCACGCTCTTAGAAAAGCGCGTGGAGTCACTCTCTCCTCCACTC TATAACGGTGATTCTTCCTTCACTTACTCTCTTCTCTTGAACGCCGTTGTTTCCCTCAGTCATCGCCTCAGGTCTATCTTGCTTGGTGCGGATGACCCAC ACTTGATCGGAACTAAACGTGCAGTTAATGATGAATTCCACTGTGAAGGGGGAACTTTTCAGACACATGAGTCCTCAGAAACTGTCATGCCTAATGCAGA GCCAATGGGTGACTCAAGTAAAGAGTATAGACCAAAGATAGTAGGAATATATATGCCACCCTCTGTTGAATATGTTGTTGCTGTACTTTCTGTATTGAGG TGTGGAGAGGCCTTCTTGCCTCTGGATCCCTTTTGGCCAAATGAAAGGATACTGTCTGTTATTTCTTCTTCAAATGCTGATCTCATTATCGGGTCACAGT CTTCATTTGGAAAAAGTAACCTTGACCAGCTTGATGAATTGCATTGGCTGGTAAAGTCAAATAGTTGTCCTGTTTTGAACTTCTCTATTGAAGAAAACTT TCAAGAACATTGTTTTCCAACAGATTTGGCATGGCCTTGTGCTATTGAGAACCAGAGAACATTCTGTTACCTGATGTACACTTCTGGATCAACCGGAAAG CCTAAAGGAGTGTGTGGCACTGAACAAGGCTTATTTTGTTAATAGGCTTACAGCTGTGCCATCACTGATGAGGACAATTCTTCCTGGATTGCAAACTCAT GATGACTCACGGATTCAAAGTTCGCTGAAATTGCTTGTGCTAAGCGGTGAAACATTTCCTTTTACCTTGTGGGAGATGATCTCAACCATATTACCAAATA CATCAATCTTGAATTTATATGGAAGTACTGAGGTCTCTGGTGACTGTACGTATTTTGATTGCAAGAGGATACCATTGATTTCGAAGGAAGATATGCTACC TAGTGTGCCAATAGGTTTACCCATTAGTAACTGTGATGTGGTGCTTCTTGGTGAAAATGGTTCATCAAATGAGGGAGAGCTATATGTTGGTGGTTCCTGC ATTTCTAGGGGCTACTATTCTGAGTTTAATATAATGTCTGATAGATTTGTAAAGTTACCTCAAAGTTATGGTTGTAGAGATTCTGTTAATGCTTGCCGAA GCCAATTATACTTTAGAACTGGTGATTTAGCCAAACAATTGCCGACTGGTGATTTTATATTTCTGGGAAGAAAAGATCGCATTATAAAAGTCAACGGACA GCGTGTTGCCCTGGAAGAAATTGAAGATTTGCTAAGGGAACATCCATATATAAATGCTGCTGCTGTGATTTGTCGAAATAATCAAGCAGAGCCTCTTCTT TTGGATGCCTTTATAATATTAAAAGACAATGGAAGATTGGGTGAACCATTAATACCTGCAATCAGAAGTTGGTTGATTAACAAACTACCATCAGTGGTGC TTCCTAATCGCTACATCTTTACAGAATCATTTCCCATGTCTTCTAGTGGTAAAGTTAATTACGAGTTGTTGGGTGGCTCAGCTTTATTGACAAAGAGTGC CCAGGATAAGGTTGGTAACATGGACTGTAGCAATCTTCTGCAACTTATTAAAAAGGCTTTTCTTGATGCCTTGATGGTTGAAAAAGTTTGCAGTGATGGC GATTTCTTTTCAATGGGTGGTAACTCTCTTTCTGCTGCACATGTTGCTCACAGTTTAGGGATTGATATGAGATTTCTGTATTACTACCCAAGTCCTTTTA AGCTTTGTATGGCTCTTCTCCAGAAAAGAGGATCATGCTCTTTGCATGACAGGCTGGATAATTGTTTAGAATTAAATACAGATGGAAAAAGTAGTTATTT TTCTTCCAGTCTTACTGGAAATTCTGGTCCACTTGAGTCAAAGATGATATCTAGAGGTAATGATGATTATTCTGTTCCTTCTAAACGCTTGAAGAGGGCT TCTATAGGTTTTACATCAGAGGTTGATGACAATTCTCCATGGTATTCCTCTTCAATATTCTTACCGTCTTCATTTAGCCGATGCAACATGGTGTCATATA AAGAGAAGCCTGCACTGATTGATACACACCAACTAACTTGGTCTCCAAATATTCCAAGAGGTAGCAGAGGACTTATGAAAGACTTTTGGAAAGTTTACAT GGAATCTTGTGTCGATGCTTCACCATTGCTTGTGTTTAAAGGCTCAGACACTTATTTGTTCATTGGATCCCACTCACATAAATTTCTCTGTATAAATGCC AGAAGTGGGAGATCACACTAGAAGGGCGTATTGAATGTACTGCAGCAATTGTTTCTGATTTTACCCAAGTTGTCGTTGGGTGTTACATGGGGAAAATATA TTTTCTTGATGTTTCAAATGGACACATCTGCTGGACTTTCCAAACAGCTGGAGAGGTAAAATCACAGCCAGTTGTAGATACACACAGACAACTGATCTGG TGTGGCTCACACGATCATAACTTATATGCTCTCGATTACAAAAATCATTGTTTTGTCTATATGCTACCATGTGGAGGCAGTGTATATGGGTCACCTGCAA TTGATGAGGATCGTGGTGTGCTGTATGTGGCCTCTACTGGTGGTCGTATAACAGCTATATCAATATTGGCTTCTCCATTTAATGTATTATGGCTACATGA GTTAGAAGTCCCTGTGTTTGGTTCTCTGGCTATCACCCAAAATGGAACTGTAATATGTTGCTCGGTAGATGGCTGTGTTCGAGCATTGGATCCAAATGGA TCCTTAGTTTGGAAGAAAACTACTAATGGTCCAATATTTGCTGGGTCATGCATATCTTCTGCTCTTCCTCATGAGGTGATCGTATGCTCCAGGAAGGGAA GTGTTTACTCGTTCAAACCGGACTCCGGGGATCTACTATGGGAATACAATGTTGGATATCCAATTACAGCATCTGCTTATGTTGATGAACACTTGCAGTT GAAATCTGATGCCTCCGATTCTTTAGACAGATTAATTTGCATTTGTTCTAGTTCTGGAGGCATTCATCTTCTTCGAGTGAACTCAAATTTCTCCGGAGAT TCGGATCTTCCAACCATTGATGTGCAAGAATTTGCAAGGCTAAACTTGCCAGGTGATATATTCTCTTCACCTTTAATGATAGGTGGGCGAATCTTTGTCG GTTGTCGGGATGATTACTTGCACTGTGTTGCCATTGAAATTCCAAAGCAACATAAAACTTAAAGCTAATGTATTTAGTCCAAATTTTGTTAAACCATATT AGGCAGTTTAGTTCTGTATTTAGATCCTCAAAACTACCTTCTAGCAGTTGAAATATTATATTTTCAGAAGAATAAAAACAAGGGAAAAGGCACAATATGT TTGATCATTCAGAGTTTCCTAAACTTAAGTGTTGTGATTGGTTAGTAAAATACTTAATTATTAAATTTTAACTTAAATATTTTTTTAACTAATCACAAAA AGTGATATATAGAGTGACATACTTTGTGGGACAGCAGATGTCCTCCGATCTCCCATA BLAST |
Tissue | pods |
Gene name | LI_gene_160458; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_440149
Blastp | Putative acyl-activating enzyme 19 from Arabidopsis with 45.28% of identity |
---|---|
Blastx | Putative acyl-activating enzyme 19 from Arabidopsis with 43.17% of identity |
Eggnog | non-ribosomal peptide synthetase(COG1020) |
Kegg | Link to kegg annotations (AT5G35930) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431468.1) |
Pfam | AMP-binding enzyme (PF00501.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |