Id Trinity | TRINITY_DN48367_c4_g1_i8 |
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Name Transcript | Ll_transcript_440140 |
Sequence | TCATATTGAAGTAACCTTTGCTTATTTTTTACCCATGAATAATTCAAGAGTACAAAAACAAATTGTAACGGTAGAAACAGATGAAAAAAGAAGCGCATGG AAGAAGAAACCCAATTCTGCTGCATTTCCCACCAATTCTTCCGACTAGCCACCGCCAACCCTAACAAAATCGCCGTCATTCACGCTTCCGGCGTCGCTCA CCTTTCCAAATACCTCCGCCAAAATTCACCATCTCCCAATTTCAACCGCGACATCACCACGCTCTTAGAAAAGCGCGTGGAGTCACTCTCTCCTCCACTC TATAACGGTGATTCTTCCTTCACTTACTCTCTTCTCTTGAACGCCGTTGTTTCCCTCAGTCATCGCCTCAGGTCTATCTTGCTTGGTGCGGATGACCCAC ACTTGATCGGAACTAAACGTGCAGTTAATGATGAATTCCACTGTGAAGGGGGAACTTTTCAGACACATGAGTCCTCAGAAACTGTCATGCCTAATGCAGA GCCAATGGGTGACTCAAGTAAAGAGTATAGACCAAAGATAGTAGGAATATATATGCCACCCTCTGTTGAATATGTTGTTGCTGTACTTTCTGTATTGAGG TGTGGAGAGGCCTTCTTGCCTCTGGATCCCTTTTGGCCAAATGAAAGGATACTGTCTGTTATTTCTTCTTCAAATGCTGATCTCATTATCGGGTCACAGT CTTCATTTGGAAAAAGTAACCTTGACCAGCTTGATGAATTGCATTGGCTGGTAAAGTCAAATAGTTGTCCTGTTTTGAACTTCTCTATTGAAGAAAACTT TCAAGAACATTGTTTTCCAACAGATTTGGCATGGCCTTGTGCTATTGAGAACCAGAGAACATTCTGTTACCTGATGTACACTTCTGGATCAACCGGAAAG CCTAAAGGAGTGTGTGGCACTGAACAAGGTCTTTCAAATCGATTTTTATGGATGCAAGGAATGTATCCACTGAATGGACAGGAACTTCTGTTGTTTAAAT CATCAATTAGCTTTGTTGATCACCTGCAAGAATTTCTCAGTGCTATTATAACTGCTTGTGTGTTAGTTATTCCTCCTTTTAGTGAGCTCAAAGAAAACAT ATATTCTATAATAGATTTTCTGAAGGTATGGTGCTTCATGATTTAGCTTTTGTAATTTGTGTGTTGTTAGTATTGTTCTCTTGGTATGATGATTGGAAAT GCTATTTTGCAATGTTTCTATGTGTATAGAGATATCAGTTAAACTTTGTTCAAAAACACTAATTTATATTTTGAACTTCACTTATATTTGAGAAACAGTC AGTATGCTATTAGTGTCTATCAGTTAGTAATGAAATTACACTTCTCTTTAAATTGCTTAACTTTTCCTGTAATATTGAATTTTTCTGTAGGCTTATTTTG TTAATAGGCTTACAGCTGTGCCATCACTGATGAGGACAATTCTTCCTGGATTGCAAACTCATGATGACTCACGGATTCAAAGTTCGCTGAAATTGCTTGT GCTAAGCGGTGAAACATTTCCTTTTACCTTGTGGGAGATGATCTCAACCATATTACCAAATACATCAATCTTGAATTTATATGGAAGTACTGAGGTCTCT GGTGACTGTACGTATTTTGATTGCAAGAGGATACCATTGATTTCGAAGGAAGATATGCTACCTAGTGTGCCAATAGGTTTACCCATTAGTAACTGTGATG TGGTGCTTCTTGGTGAAAATGGTTCATCAAATGAGGGAGAGCTATATGTTGGTGGTTCCTGCATTTCTAGGGGCTACTATTCTGAGTTTAATATAATGTC TGATAGATTTGTAAAGTTACCTCAAAGTTATGGTTGTAGAGATTCTGTTAATGCTTGCCGAAGCCAATTATACTTTAGAACTGGTGATTTAGCCAAACAA TTGCCGACTGGTGATTTTATATTTCTGGGAAGAAAAGATCGCATTATAAAAGTCAACGGACAGCGTGTTGCCCTGGAAGAAATTGAAGATTTGCTAAGGG AACATCCATATATAAATGCTGCTGCTGTGATTTGTCGAAATAATCAAGCAGAGCCTCTTCTTTTGGATGCCTTTATAATATTAAAAGACAATGGAAGATT GGGTGAACCATTAATACCTGCAATCAGAAGTTGGTTGATTAACAAACTACCATCAGTGGTGCTTCCTAATCGCTACATCTTTACAGAATCATTTCCCATG TCTTCTAGTGGTAAAGTTAATTACGAGTTGTTGGGTGGCTCAGCTTTATTGACAAAGAGTGCCCAGGATAAGGTTGGTAACATGGACTGTAGCAATCTTC TGCAACTTATTAAAAAGGCTTTTCTTGATGCCTTGATGGTTGAAAAAGTTTGCAGTGATGGCGATTTCTTTTCAATGGGTGGTAACTCTCTTTCTGCTGC ACATGTTGCTCACAGTTTAGGGATTGATATGAGATTTCTGTATTACTACCCAAGTCCTTTTAAGCTTTGTATGGCTCTTCTCCAGAAAAGAGGATCATGC TCTTTGCATGACAGGCTGGATAATTGTTTAGAATTAAATACAGATGGAAAAAGTAGTTATTTTTCTTCCAGTCTTACTGGAAATTCTGGTCCACTTGAGT CAAAGATGATATCTAGAGGTAATGATGATTATTCTGTTCCTTCTAAACGCTTGAAGAGGGCTTCTATAGGTTTTACATCAGAGGTTGATGACAATTCTCC ATGGTATTCCTCTTCAATATTCTTACCGTCTTCATTTAGCCGATGCAACATGGTGTCATATAAAGAGAAGCCTGCACTGATTGATACACACCAACTAACT TGGTCTCCAAATATTCCAAGAGGTAGCAGAGGACTTATGAAAGACTTTTGGAAAGTTTACATGGAATCTTGTGTCGATGCTTCACCATTGCTTGTGTTTA AAGGCTCAGACACTTATTTGTTCATTGGATCCCACTCACATAAATTTCTCTGTATAAATGCCAGAAGTGGGAGATCACACTAGAAGGGCGTATTGAATGT ACTGCAGCAATTGTTTCTGATTTTACCCAAGTTGTCGTTGGGTGTTACATGGGGAAAATATATTTTCTTGATGTTTCAAATGGACACATCTGCTGGACTT TCCAAACAGCTGGAGAGGTAAAATCACAGCCAGTTGTAGATACACACAGACAACTGATCTGGTGTGGCTCACACGATCATAACTTATATGCTCTCGATTA CAAAAATCATTGTTTTGTCTATATGCTACCATGTGGAGGCAGTGTATATGGGTCACCTGCAATTGATGAGGATCGTGGTGTGCTGTATGTGGCCTCTACT GGTGGTCGTATAACAGCTATATCAATATTGGCTTCTCCATTTAATGTATTATGGCTACATGAGTTAGAAGTCCCTGTGTTTGGTTCTCTGGCTATCACCC AAAATGGAACTGTAATATGTTGCTCGGTAGATGGCTGTGTTCGAGCATTGGATCCAAATGGATCCTTAGTTTGGAAGAAAACTACTAATGGTCCAATATT TGCTGGGTCATGCATATCTTCTGCTCTTCCTCATGAGGTGATCGTATGCTCCAGGAAGGGAAGTGTTTACTCGTTCAAACCGGACTCCGGGGATCTACTA TGGGAATACAATGTTGGATATCCAATTACAGCATCTGCTTATGTTGATGAACACTTGCAGTTGAAATCTGATGCCTCCGATTCTTTAGACAGATTAATTT GCATTTGTTCTAGTTCTGGAGGCATTCATCTTCTTCGAGTGAACTCAAATTTCTCCGGAGATTCGGATCTTCCAACCATTGATGTGCAAGAATTTGCAAG GCTAAACTTGCCAGGTGATATATTCTCTTCACCTTTAATGATAGGTGGGCGAATCTTTGTCGGTTGTCGGGATGATTACTTGCACTGTGTTGCCATTGAA ATTCCAAAGCAACATAAAACTTAAAGCTAATGTATTTAGTCCAAATTTTGTTAAACCATATTAGGCAGTTTAGTTCTGTATTTAGATCCTCAAAACTACC TTCTAGCAGTTGAAATATTATATTTTCAGAAGAATAAAAACAAGGGAAAAGGCACAATATGTTTGATCATTCAGAGTTTCCTAAACTTAAGTGTTGTGAT TGGTTAGTAAAATACTTAATTATTAAATTTTAACTTAAATATTTTTTTAACTAATCACAAAAAGTGATATATAGAGTGACATACTTTGTGGGACAGCAGA TGTCCTCCGATCTCCCATATAGATTTTGTGTACTAAGGAAGCACATTTGTAGAGAATGGTGAAGGTGAAAGGCTCTACGTTAATGTGAAGGTTCTTTTTG GTGCATTGAGGTTTTTTTGGGTACATTGTTAATATGAAGGTTTAATTCTAGATATCAAGTTTAAATGTACCAAATCCTGTCTCAAAATCTGTACCAAACT AATTACAGTATGACATATCAGTTAAATAAATT BLAST |
Tissue | pods |
Gene name | LI_gene_160458; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_440140
Blastp | Putative acyl-activating enzyme 19 from Arabidopsis with 45.28% of identity |
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Blastx | Putative acyl-activating enzyme 19 from Arabidopsis with 43.93% of identity |
Eggnog | non-ribosomal peptide synthetase(COG1020) |
Kegg | Link to kegg annotations (AT5G35930) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431468.1) |
Pfam | AMP-binding enzyme (PF00501.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |