| Id Trinity | TRINITY_DN48377_c0_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_439587 |
| Sequence | CTTTTGCATGTGAATGTTTCGTATTCATAAACTTTGGTTTGAATATTTAATTTGAAACATTGATAACTAACGAAGATTTGAAATTGAATGACATATAGAA GAGTAAGGAGGAGATAGTAATAGAATTTGGATGCATTAAGCAATGAGTAGTAGTAGTAGTTATAGTTATCGCGTTGCGATTCCAGGATCTTCCATCGAAG ACGAAGCGAGTGAATCTTCTTCTTCTTCATCATTCTCAACTTCATCGCTCAATTTCTCTTCTGGAAACCCTAGAATCGAAGAAACTCGTGGCCTCATGCA TCTTTTCCGTCACGATCCTAACTCTTCTCTTTCATCTTCGCCGCCGCCTCCTCTTCCTGTTGAACGGAAACCTCTTGTGTGTGTTGTTGGAGTTCCGAAT CATATGACTTATGCCGATTTCTGCCAATTCTCCGGTTCCTTTATTCACCATATCCTCGAGATGCGCATTGTTAGATTGGATGGGATGGAGGACTATTACA GTGTTTTAATACGGTTCAATGACCAAGACTCCACAGACAGCTTCTACAAGCATTATAATGGCCGCCGCTTCTCATCTCTTGAGGTTTCTCTTCTGTTTAA CAATTTAATCAATTTTGCTCAACACTTTAACTTTGTCGAATCTCAATGATATGGAATCAACAATGTGATAGTATTAATGCCATGTTATTTTCTGGAAGCA ACGCATTGTATGGCTTGAGTGCAGTGTCTTTTAGAAGCCCCAACAAGGATAGTCGATTAGATGGAGGGTAACCCAGTCGATAGAGGCATATGGAGACTAA AAAGACTGCTGGCGGAACTATCAGGAATGGTTTAGATGTCAATGGTTTTTAGAAAATAAGGGCGCCATTTGTTGTTGCTGCTCCTGCTCACACTTGATTA CTTGTTCAATGAAAATCGATTCAATTATTGGTTAACATTTTATTTTGCTATTAATCTTGTTGCACTTTTCTATATTTAGGTGGAGGTTTGCCGTGTCCTT TTCACATTAGATGTGCAGTACACTGGTTCCATTGAACATGCACAGCCATCTAATGCTATTTCAACTGAACAGCCTACATGTCCTGTCTGCCTCGAGCGAT TAGATCAAGACACGGGTGGAATTCTTACAACTATATGCAATCATTCTTTCCATTGTTCGTGTATTTCAAAATGGGCAGACTCTTCTTGTCCTGTATGCCG CTATTGCCAGCAGCAAGCTGAAAAATCTATATGTTTTGTTTGTCAAACCACTGAAAACCTTTGGATATGTGTTATATGTGGTTTTGTTGGGTGTGGAAGA TATAAAGAAGGGCATGCCATTATACACTGGAAAGAGACACACCATTGCTACTCCCTAGAAGTGGAGACCAAACGCGTGTGGGATTATGTGGGAGACAACT ATGTTCATAGACTTATTCAGTCCAAAACTGATGGGAAATTGGTTGAGCTGAACTCTCACTGTGTGCATGCAGACAATGGGTGTGGAAGCTGCAGCTTTGA AGATAATGGCATGAGCGAGGCTATACTTAATAGTAAAGTTGAAGCTATTGTCAATGAGTACAATGAATTGCTTGCTAGTCAACTTGAAAGCCAAAAATTA TATTTTGAATCCTTATTAGAAGAAGTAAAAGAAGAAACTGAACAGGAAATTTCCAAAGCTGTTGAGAAGGCTTTGAGTCTCAAAAAACCAAAGATTCAGG CCAAGATCGACAGAGTTAATAAAGAGAAGAAATTTCTGGATGATCTTAATGAGAACCTTGTGAAAAATGAGGAGATTTGGAAAGCAAAGTTACTTGAGAT TGAAGAGAGGTTTGTAAACTGATGGATAGAGGGTGAGCATCAACGCAATGGTAAGGTTGCTGCTTAGTGATCATGAGATCACGAGTTCAAATCCTAGAAA CAATATATCCGCTTGCAGGGTTAAAGGGACAAGAAAGCTGTAAAACTGGCAGATGTTAGAGTAGCAGGCTTGGAAGAACAGCTCAGAGATCTAATGACTT GTCTTGAGGGTAGTGAGAAGGTACAACAGCTGCCGGGGACAAATGAAATTAAAGACGGGACTATCTTCGGCATACCCAGAGAATCCTCACCAGCTAGTGT TTCTGAGCCAGGAAGAAAAGCTTAAAAGATTGATATTTTTCTTCCCTTTTGTGGAATTCATTGCTCATATTGACTTCCACCATATTTTGGGTACGTGACT TACATTCACAAGTTTATACAAACTGCACAGGTGGATCCAAGAATTGGAATGTTTTCACCTAATTTTATTTTTCCGTTTAAAACTTAGATGTACCATGCAT ATATTTGTTCAGGCTTGTCAGTAGAAATATTTCCAACTATTTGTAGTCATGCTTAAGTTTGATTGATATAAAAATATAGGAAAAGGTTAAATACAGTTCC TTAGGCATGAATGAGAGATTAGAATATCCCATGGTAACAGGTCCCACGACAAAGGCCGAAATGTAAGATTCATCGAGGTGCGCCCACACCATTGAAAATG TC BLAST |
| Tissue | pods |
| Gene name | LI_gene_160577; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_439587
| Blastp | - |
|---|---|
| Blastx | RING finger protein ETP1 homolog from Schizosaccharomyces with 35.02% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436338.1) |
| Pfam | - |
| Rfam | - |
| GO | - |