| Id Trinity | TRINITY_DN48379_c10_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_440224 |
| Sequence | AATATGTGCGAATATTATACTCGTAATACTATATGGTGAAATCTAGGCTAAAATTTCCATTTTCCCTTCATCCCTTCATTTGCGGTTAAAATTTCATTTG CTGATCGAATAGAATGAAATGAAATGATGTTAGCATTGGACCAAAAATCAAATTGGAAAACTGAATCGTTACCGTACGATGCGATTGGTGTATTCTGAGT TGAAACCACAGAATCTTGCGTATTCAGAATCAGAGGAACCTGAGAAAACGGAAGAGAAGAGAAATCTCACACTCCACTAGGGTTTATTCATCCATGGCGA AAACCTTTCTCTCTCTCCTTCTCCTCTTTACCTTTCACATTCCCTTATGCTTTTCAGGTGAATCTAGCTCCATGGAATCAGTTCCTGATCTTCAGAACAC TATGTACAATGTCGTCGATGGATATCCTTGTGTGAGGTTACTCAATCTTTCTGGAACCATCGGTTGTTCAAATCCTGGGCGAGATAAGGTCGTGGCTCCA ATTGTACGATTCGAAAACGTTGATGAGATATCTGAGCCTTCTGCTATACTGGTGTCAGAGAATGACTTTCCAAATCTCTTTGCCAGAATATCTGATGACA TAAGCTTTGCGAGTAAAGTTGGTGGTGTTCTTGTTGAACCAGGAGCAGACATGCAGAATAAGTTAAAGGGATTCTCTCCTGATCAAAAGTTTCCACAAGC TGAGTTTGCTCCTTATGACAATATCAACTACAAATGGAATCCAATTGGTTCTGGTATTATGTGGAAGTCATACAATTTTCCTGTTTTTTTACTGGCAGAA AGTGGCACAAAGACTCTCCAAGAGTTTATAACAAAGAATGATGGCAAATCAAAATCTTATACTTCTAATGTCGCCGAGTTTGATCTGGTGATGCAGACAA TGAGATCTGGAACACATGATTCAGAGTCGTGTTTGAAAGAAGCAACTTGCCTCCCGTTAGGTGGATACAGTGTCTGGTCATCTCTTCCTCCAATCAATGT TTCGTCCTTAAAGAAACCTAAGTCCATTATATTGACAGTAGCATCTATGGATTCAGCTTCTTTTTTCCGGGACAAAAGTCTTGGTGCAGACTCCCCTATT TCTGGTTTAATTGCATTACTGGCAGCAGTTGATGCACTCTCTCATGTGGATGGTCTTGGTGACCTTAGTAAACAGGTGCATGCAAGTTGATCTATGATTT TTTTCCATTGAAGTTTTTGGTCTGTGTTACTTAAATTGTTTGTTGCTACCGAGCTATGACTTTATCTAATTTCCTCCCTTTTTTGCTTACCTTGAAAGGC CTTTTGGTAGGAAGGGTTATCCTTATGGGTTAATATATCTCAATTATTGGATTTTCCCGGGCTTTTGAGAGAATAGGGCTTCTGAGAGAATATCTATTGT TGTATACTTCTATCATCCTTTCAGTTTCTTGTGATGAGTTTGTGTTGTTGTTAGGAGTGCACTAGTTGCAGCCTTGTCCTGTTTAACGTGCTTTTTGACT GTGGTAGGAATTCTTGCGTGCTAGGCCTGCTTCCCCTTTTTCTACATAGTGAATTTCTGGTTCTTCTTGCTGAAGGAAGAGGAAGAGGGGTGCAGGGGGC ATAAATGTATTTGCCTTTAACTAAAAACTTGTTTTTGGGATTACTTTTTAAAACCTTTCTATAATCGGTTTTTTTAAGGATCCCAAAAATGCAAAGTCTT CCTTGGGAAGTGGTGTATGTAATAGATTGAAGAGTCAACACTTAATTTTTCGATGAAAACCTTCACTTTTGGCTTCCGTAGGGCACTGGTTAAGGAGTTA AAAAATGCAAAGGCTTCATTTGGAAGTGATATATTAATAGATTAAGATTCAACATTTTTTTAATTTTTGGTATGAAGACTGGTAGAAGCCCCCATAAGGA GGGTTGTCCAATTCCTAGAGGAAGTGGGAGACCAAGAAAAACCATAGGCAAAATGATTAAGAAAGACATAGAGATCAATGTTTTGACAATGAACATGATT TATGATAGAGCATTATGACATCGCTCGATCTATGTTGCCGACCCCACTTAGTGGGATGGTTAGCAAAACTGTTTTATATACTTAAGAACCAATTATTTTA CTGAAATATAACTACTACCGGTCTAAACTTCACTGGTGACACTTTCTTAAAAGTATGCAGCTTGTTTTTGGAGTTTTCACTGGTGAAGCATGGGGTTACC TTGGAAGTAGGAGATTTTTGCTCGAACTTGACATGCACTCAGATGCTGTTCATGGCCTTGATAGCTCATTGTTTGAAACGGTCATTGAAATTGGCTCTGT TGGAAAGGGTTTCAGTCAAGGTGTCAACAACTTTTTTGCTCATTCAAAAGGGGATTCTTCTGCTACAAATCAGACAATGGCTGCCTTGAAACGTGCTCAA GAGACACTGCGAACTGAAAACATAAAGATCACATCTGCGAGTGCCTCAAATCCTGGGATACCCCCATCCTCGTTAATGGTCTTTTCGAAAAAGGTGCTGA TATCTTAAAGTGAATGTCTTAAAGTTTACTAGTGAAATCCTTCTTGAAGAGAAAGGGCATGATGAATTGAGTGAAGTTCTATTTCTGCTTTCTCTTAATG CATGGCATTGGAGATTATCCAGTATCTTTTTTTGAATTTTGAGTCACCTTGCTTCTACCTACGCCATTCTTGTACCAAGTTTCCGACACATTTACTTGAT TTTGTTTCGATAAGCTCACCTTTTGTCCCTATTTAGATTCATAGACATTCAATTCAATCATGCATGTGAAATAAATTCGGCATGTGAGCACCATATTTGG ATATTATCAATTAGCAACTGTGTAAACCCCATATTTAAATATTGTGGGTTGTACTAGGAGAACCCAATTTCTAATATAGCATGAATAGAATCATTGCTAC TGACATGGATTGCCTGCTTGTATTAACGTTCCATGTTGAATCCCATCACTGATGTTGGCATGTATTTAACTCCAAAGTTTTGCATTATGCACCGATTTGC TTTTGTGATTTCCCTCTTTTTATCAGAATCCTGCAATCTCTGGTGTTGTCCTGGAAGACTTTGACTCTGTCTTTGTCAACAAGTTCTACCATAGTCATCT TGATGATTTATCCAATGTAAACTCGTCAGCCGTGGTTGCTGCTGCTTCTCTTGTTGCCCGAACCCTTTACATACTCGCTAGTGAAACTAAAGATGTACAA GATTCAGCTTTGACTTCTATAAATGTAAATGTCTCACTTGTTGAACAACTTATGGGTTGCTTGTTGGGTTGTGATCCTGGTCTTTCTTGTGAGTTGGTGA AGAAATATATTTCACCTGCATCAACCTGTCCGGGCCATTATGTTGGTGTTATCCAAGATGAACCTTCATCTACACCCTATTCAGGATACATTAATGATGT TCCCAGGTTCATATGGAATTTTCTAGCGGACAGAACATCTATCTCAAGGGAGCATAATGGTAGCTCAAATTGTCAAAATGGTTGCAATGGTAGAGATGAA GTTTGCATTAAAGCAGAGATTGATGGGAAGGGTGCTTGTGTTCTCTCTACAACTAGGTATGTTCCAGCATATTCAACGCGGTTAAAGTTTGAATCAGGAG TGTGGACTGTTTTGCCCGCTAATTCCTCCGACAGCATGGGAGCTGTGGACCCTGTCTGGACAGAAAGCAATTGGAATTCAATAAGTATGCGGATCTACAC GATCCAAGTTGCTGCTTATGATCGTCTTGTTCTATTCGTGGGTGTCATTCTGACAGTCTTGGCATACCTTGCAGTAACCGTCACAAGAGCTCTAGCAATC AAAGCTATGAAGAGGGATTAGCATCTTCTTTTGGGTAACTGACTAAATTTTCTGATGATACTAGGAAAAGAAATTAATTAGGGTCATCTAAAACTCAAAT TCTTAGTTTGGAAAATTTCAAGGATTGCATTATTTGGGCTGCATCCTTGTGCTTGTGAAGTCTATTTTAAAGTTCGCTATAGTGCAAACATTTTTACGGC ATGTAGGGTTGCACGTGTAATGAAATGTATGAAAATGAAAATACAGCTTTTTGTATCGTGTCTTGTTCCTTTGCGCTGTAAATGTATCGACAGTACTTAA ACCCTTCTTATTTTGTTAATCTATCAACCCGGCCATGGATTTTGATTTTTATCAGTGGCCATTGTGATGAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_160585; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_440224
| Blastp | Nicastrin from Arabidopsis with 61.38% of identity |
|---|---|
| Blastx | Nicastrin from Arabidopsis with 62.5% of identity |
| Eggnog | nicastrin(ENOG410XT6X) |
| Kegg | Link to kegg annotations (AT3G52640) |
| CantataDB | Link to cantataDB annotations (CNT0002450) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419602.1) |
| Pfam | Nicastrin (PF05450.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |