Ll_transcript_440227

• Id Trinity: TRINITY_DN48379_c10_g1_i7
• Name Transcript: Ll_transcript_440227
• Sequence: AATATGTGCGAATATTATACTCGTAATACTATATGGTGAAATCTAGGCTAAAATTTCCATTTTCCCTTCATCCCTTCATTTGCGGTTAAAATTTCATTTG CTGATCGAATAGAATGAAATGAAATGATGTTAGCATTGGACCAAAAATCAAATTGGAAAACTGAATCGTTACCGTACGATGCGATTGGTGTATTCTGAGT TGAAACCACAGAATCTTGCGTATTCAGAATCAGAGGAACCTGAGAAAACGGAAGAGAAGAGAAATCTCACACTCCACTAGGGTTTATTCATCCATGGCGA AAACCTTTCTCTCTCTCCTTCTCCTCTTTACCTTTCACATTCCCTTATGCTTTTCAGGTGAATCTAGCTCCATGGAATCAGTTCCTGATCTTCAGAACAC TATGTACAATGTCGTCGATGGATATCCTTGTGTGAGGTTACTCAATCTTTCTGGAACCATCGGTTGTTCAAATCCTGGGCGAGATAAGGTCGTGGCTCCA ATTGTACGATTCGAAAACGTTGATGAGATATCTGAGCCTTCTGCTATACTGGTGTCAGAGAATGACTTTCCAAATCTCTTTGCCAGAATATCTGATGACA TAAGCTTTGCGAGTAAAGTTGGTGGTGTTCTTGTTGAACCAGGAGCAGACATGCAGAATAAGTTAAAGGGATTCTCTCCTGATCAAAAGTTTCCACAAGC TGAGTTTGCTCCTTATGACAATATCAACTACAAATGGAATCCAATTGGTTCTGGTATTATGTGGAAGTCATACAATTTTCCTGTTTTTTTACTGGCAGAA AGTGGCACAAAGACTCTCCAAGAGTTTATAACAAAGAATGATGGCAAATCAAAATCTTATACTTCTAATGTCGCCGAGTTTGATCTGGTGATGCAGACAA TGAGATCTGGAACACATGATTCAGAGTCGTGTTTGAAAGAAGCAACTTGCCTCCCGTTAGGTGGATACAGTGTCTGGTCATCTCTTCCTCCAATCAATGT TTCGTCCTTAAAGAAACCTAAGTCCATTATATTGACAGTAGCATCTATGGATTCAGCTTCTTTTTTCCGGGACAAAAGTCTTGGTGCAGACTCCCCTATT TCTGGTTTAATTGCATTACTGGCAGCAGTTGATGCACTCTCTCATGTGGATGGTCTTGGTGACCTTAGTAAACAGCTTGTTTTTGGAGTTTTCACTGGTG AAGCATGGGGTTACCTTGGAAGTAGGAGATTTTTGCTCGAACTTGACATGCACTCAGATGCTGTTCATGGCCTTGATAGCTCATTGTTTGAAACGGTCAT TGAAATTGGCTCTGTTGGAAAGGGTTTCAGTCAAGGTGTCAACAACTTTTTTGCTCATTCAAAAGGGGATTCTTCTGCTACAAATCAGACAATGGCTGCC TTGAAACGTGCTCAAGAGACACTGCGAACTGAAAACATAAAGATCACATCTGCGAGTGCCTCAAATCCTGGGATACCCCCATCCTCGTTAATGGTCTTTT CGAAAAAGAATCCTGCAATCTCTGGTGTTGTCCTGGAAGACTTTGACTCTGTCTTTGTCAACAAGTTCTACCATAGTCATCTTGATGATTTATCCAATGT AAACTCGTCAGCCGTGGTTGCTGCTGCTTCTCTTGTTGCCCGAACCCTTTACATACTCGCTAGTGAAACTAAAGATGTACAAGATTCAGCTTTGACTTCT ATAAATGTAAATGTCTCACTTGTTGAACAACTTATGGGTTGCTTGTTGGGTTGTGATCCTGGTCTTTCTTGTGAGTTGGTGAAGAAATATATTTCACCTG CATCAACCTGTCCGGGCCATTATGTTGGTGTTATCCAAGATGAACCTTCATCTACACCCTATTCAGGATACATTAATGATGTTCCCAGGTTCATATGGAA TTTTCTAGCGGACAGAACATCTATCTCAAGGGAGCATAATGGTAGCTCAAATTGTCAAAATGGTTGCAATGGTAGAGATGAAGTTTGCATTAAAGCAGAG ATTGATGGGAAGGGTGCTTGTGTTCTCTCTACAACTAGGTAT
• Tissue: pods
• Gene name: LI_gene_160585;
• Additional information: details;

Expression of Ll_transcript_440227

FPKM

• PAB: 1.8
• PNAB: 10.8
• PS1: 14.6
• PS2: 8.9
• PS3: 13.1
• PW1: 10.1
• PW2: 10.3
• PW3: 6.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_440227

• Blastp: Nicastrin from Arabidopsis with 64.59% of identity
• Blastx: Nicastrin from Arabidopsis with 65.02% of identity
• Eggnog: nicastrin(ENOG410XT6X)
• Kegg: Link to kegg annotations (AT3G52640)
• CantataDB: Link to cantataDB annotations (CNT0002450)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419602.1)
• Pfam: Peptidase family M28 (PF04389.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;