| Id Trinity | TRINITY_DN48386_c0_g2_i10 |
|---|---|
| Name Transcript | Ll_transcript_440028 |
| Sequence | ACCAAAGGTCCCATTCTCTCTCTCTCTCTCTAACCTCGATGCGCATTCATTCAACACTTTCTTTTACTATTGCATATCACTTCCACCAATTCTTCTATTT TGGCGTTGACCCTTTTTTATTTATTTATATTCTTCTTCTTGATTCACTATTTCGTGAGAGTTGAGAATTTGCTCTATCAAGAACCGAGGGAGGTCCAGGC CCATGATATTTTGATATTTGTCTGTAATAGGAAGGCCATGGCACGAGCTTCACCATTACTTCTAATTTTTTTGGTTCTTGGTTCTTCCTTTGCCACATAT AATATGGTGACAATGATAATCCATTATGGATCTTCAGAAAGTGTGGCTATTGCTGATGGAGCATTACTGTTGGACCCCATTACTGAGATGCCTGCACATG TAAAGAATCGGAAGACATCTAAAGCACCTTTTCATGTTGCCTTAACAGCTACCGATGCTCCATACAACAAATGGCAATGCCGCATCATGTATTATTGGTA TAAAAAACAAAAGAACTTGCCTGGGTCAGAGATGGGAGGATTCACTAGAATTTTACATTCTGGAAAGCCAGATAACTTGATGGATGAAATTCCTACTGTT GTGGTTGATCCTCTTCCAGCAGGTGTGGACCGGGGATACGTTGTCCTGAATAGACCATGGGCCTTTGTTCAGTGGCTGGAAAGGACTACTATAGAAGAAG AATATGTGTTAATGGCAGAGCCTGATCATGTGTTTGTACGTCCTCTTCCCAATCTGGCTCATGGAGGACATCCAGCTGCTTTTCCATTTTTTTACATTAG GCCTGACCAGAATGAAAAGGTCATTAGGAAATTTTATCCGGAAGAGTATGGACCAGTTACAAATGTTGATCCGATTGGCAATTCTCCTGTAATCATCAGA AAGGATTTGATCGCAAAGATTGCCCCAACATGGATGAATGTTTCTTTGAAGATGAAAGAGGACCCAGAGACTGATAAAGCTTTTGGATGGGTACTAGAAA TGTATGCTTATGCTGTAGCATCTGCCCTGCATGGTGTGCGACATATTCTACGGAAAGACTTCATGCTTCAGCCTCCATGGGATCTTGAAACTACCAATAA GTACATAATACATTATACTTATGGATGTGACTACAATCTAAAGGGTGAATTGACATATGGTAAAATTGGTGAGTGGCGATTTGACAAAAGGTCACATCTG CGAGGACCTCCACCAAGAAACTTGCCCTTGCCCCCACCAGGGGTTCCTGAAAGTGTGGTGACCCTTGTGAAGATGGTGAATGAGGCTAGTGCTAACATCC CCAATTGGGACACATCATAAATATGGTCTTTTTTCTCCACTTCATCATATTCATAGTGCATGTTTTGAAAAGGAAAAGAAATTTATATTACATTGAGACA ATATTTTCTTCTCAGTTTAGTTATAGAATGGTAGATCAATGTACAAGATACCCCTTTATATTGTTATCTCTTTTCTGTTTTTTGGTGATATTCTTGAATG GATTTTGAGCTAGTATTCCAATGCCAATAATTTGTTTAAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_160663; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_440028
| Blastp | Hydroxyproline O-arabinosyltransferase 3 from Arabidopsis with 77.16% of identity |
|---|---|
| Blastx | Hydroxyproline O-arabinosyltransferase 3 from Arabidopsis with 77.09% of identity |
| Eggnog | NA(ENOG410Z627) |
| Kegg | Link to kegg annotations (AT5G13500) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453517.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |