Id Trinity | TRINITY_DN48387_c0_g1_i14 |
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Name Transcript | Ll_transcript_440109 |
Sequence | CTATAATCCTTACTCAACTTTCTCCTCCACACGTCTCTCTCTGCAACCTAAACACTTCAAAGATTCTTTACAACTCTTCATATTCAACATTATCATTAAA CAAAACAAACCCATAACATTTTTTTTTAACTTCAATCAATTAATAATAATACCACCTTTTCTTCTAATATATCACTTCTACACGTTTTACCTTTATATAT TCCAGTTAGATTAGCCTTATTTTCCGGATCCTAACAAAAAAACAATATATACATGTTCATCAATAAAGTAAACATTAACTCACCAAAATAACTAAATAAA ATAATGATTAAAATCCACAAAGCTCTCTCACACATAAAGCTTTATAGCCACTACCACCCCTTTAATGGCTTATTATTGCTGGTACATTGAATAACTTATA ATATTTCTATATATTTGTTTTAAAGCATCTTTCAATATTCTATTCCAATAATATTTGTTTTTTTCTTTTCTTTTTAGAAATATATATACTTTTTTCTTTG TTTGTGGCAGTGAGAGTCACTTTTGATTTGATTGGTGACGTAATCTGTGTGTTTTAAATAAAGCTGAATCTAAATCTAAGTTTGTGTTTATATATTTATG TGAATGGTATAGAATTCAGGGCTGCATTTTATTTCAAGAAAAGAAGAAGAAAAAGAGGGTAAAAGATTAATATCATCAACAAGTATGAAGCTAGAAGGTG TGGATGATAAATTGCAAAAGATATTGGATGCTAATATGGATGAAGTTCCAGCTAGAAGACATGCTCGTGAGGCCTTTAAGGATATTCAGCTTGGGATTGA CCATATTTTGTTTAAGACTCCATCAGATGGACTGAAAATAAAAGAGTCATATGAGGTGAACTCAAATGGCATAGAAATCTTCTGCAAAAGTTGGCTTCCT GAGGCATCTAAGCCGAAAGCAGCGGTGTTTTACTGTCACGGTTATGGAGACACTTGCAGTTTTTTCTTTGAAGGAATAGCTAGAAAGCTGGCATCGTCTG GATACGGTGTTTTCGCTATGGATTATCCGGGTTTTGGTCTTTCTGAAGGTCTCCATTGCTATATTCCCAGTTTTGACGAGCTAGTTGACGATGTCATTGA GCATTACTCCAAAATCAAAGGTACTTAAACTCGCATTAACCCATGTCCTGAAATTCTCAGTCATTGTGAAATTCGATGATTATAAATCTGTCGAGTTAGT CTTGGTTTCTACTCTGGGAGGGGATCAAATTCTATATTGTTCCTAGTGGACTGTGTAGTTTTACAGTTCTGTCAAGGGATCTAGTAATGCATAACTTTTA CATCTGTTGTATAAACTATTTGCATGAATTAATACTGCATACTGATTAGTTATGTCTTGCAAGGGTCTTAAGGTATTCATAGGCTTTAACTATTCACCCT TGTTGGTACAGGCAAATTATTAAGCTTTATGAAAAACGTTTAATCAGGTCGAAACTTTCGACACGATTTTCTTCATACAATGAAGCTTCACTATCTTCTA TTTTAGGTTGCAGCTAAATTGCACTTGCAATTAGATGTTCTGTAAATATTCTATGAAGAATATTTTTCATTACAAAGAGAGTATTGTACTACTATATTCA TGCAAAATGTTTGGTCTTTTCATTGCAGAAAACCCGGAGTTTCGTTCTCTTCCGAGCTTCCTATTTGGACAATCTATGGGTGGAGCTGTTGTGTTAAAGA TGCACCTGAAACAACCTAACGCTTGGGATGGCGCCATTCTCGTTGCGCCTATGTGTAAAATTGCAGATGACATGGTTCCACCAAAGTGGCTCACTAAGAT CCTCATTGGTATGGCTAGCGTTCTTCCGAAGCATAAGTTAGTTCCACAAAAGGATTTAGCAGAGGCAGCATTCCGAGAGCCGAAGAAGAAGGACCAGGTT TTTGTTCTGTAATCCAACATAATTTTATTTTTGAATGCAATCTAAATTCAAAGATCATCTATAGATTATACATATTAACACATCCATTCATGCAACCTAG AAGATATGTGCACTATGGCATCTTTCCTTCTGCCCCTACCATTATTCCGGTTTTCGTTCAATTATGCGCTTCTTTTTAATCCTTGTAAAGTAAGTACTTG AAACTTTTCTAATCTCTCTGCAGGCAGCCTATAATGTTATTGCTTACAAGGATAAACCGCGCTTGCTGACTGCTTTAGAAATGCTTAAAACTACCGAGGA AATAGAACGACGATTGGAAGAAGTATGTTCTAATCTTCTGACTTATCTACCTTTTCTTGTTAAATGTCTAAACCAAGTGCAGCTGTATGCTCAAACCTTC TTTTTGGCTTCCTCAACTCTTTCCGACAGTTGTCTTCGATTTCTTTTTCTTTTTGTTGTGAATTTGGGTTAAGGACATAGGTTCAAATCACGATAACATG TCCGAGTCTAGGGAGTTTATATGTTCACAATCTTATCCTCAAAACCAAGTAGTCTATTTCCAAGATTTGAATCGTATTTCCGAGTACAAGGTTGCACATT TTCGTTGCGACAAAGGTCATTCATATAATATTGTTGTTAGTCTTTTGAGAATAGTGTAATGAAGTTTCTTTAACTTAACATGTAATGGCTGTGATTACAG GTCTCTCTACCATTATTAATCCTTCATGGTGAGGCTGATACTGTGACTGACCCATCAGTGAGCAAGGCCTTATATGAAAAAGCTAATTGTTCAAACAAGA CTCTTAAGCTATACAAAGATGCTTATCATTCTCTTCTGGAGGGTGAGCCTGATGAAACAATAGTTCAAGTTTTTGATGATATCATTTCTTGGCTTGATAA GCACAGTTTCAAAGTTGAAACATAGTTAATCTTCTTCTTAATAGTGATCATTTTTTTCTATCTCTTGTAATTCAAAAGAAGAATATTCAGATTGGTTCAG TGAAGGAATAAAAATAAATAAATGTTGCTTATGCAGAAGTGGCTTATATTTGTTCTTTACATTTTAGCAGATGTAGTCTTGTGTGAACAAAATGTATATT CTTTTACATAAGAATGAAATAAAGATGAGAACAAAATGTATATTCTTTTATTAATTGTTTTACTAACTTAATGAGTATTCTTTTTCTCCCTAAAGTTAC BLAST |
Tissue | pods |
Gene name | LI_gene_160668; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_440109
Blastp | Caffeoylshikimate esterase from Arabidopsis with 32.32% of identity |
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Blastx | Caffeoylshikimate esterase from Arabidopsis with 54.24% of identity |
Eggnog | alpha beta hydrolase fold(COG2267) |
Kegg | Link to kegg annotations (AT1G52760) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428652.1) |
Pfam | Serine aminopeptidase, S33 (PF12146.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |