Ll_transcript_440091

• Id Trinity: TRINITY_DN48387_c0_g1_i8
• Name Transcript: Ll_transcript_440091
• Sequence: GAATTCAGGGCTGCATTTTATTTCAAGAAAAGAAGAAGAAAAAGAGGGTAAAAGATTAATATCATCAACAAGTATGAAGCTAGAAGGTGTGGATGATAAA TTGCAAAAGATATTGGATGCTAATATGGATGAAGTTCCAGCTAGAAGACATGCTCGTGAGGCCTTTAAGGATATTCAGCTTGGGATTGACCATATTTTGT TTAAGGTATACCCATGTCTTTTATATTTCTTCTTTTCAATTTTCTCAAGTTTCTGAATTTCATTGATCACCGTGAGACTCGGTCTCGAAGGTAATAGTTC AAATCCTAGATATATATAATCTTTTTGTGTCACCCGACTTTTTTTGTTGTTAAATTAGAGAGTCTAAATCTTAAAAAAGAGTTTTTTGCCTAAATTCCAT TAGTAGGAGTCTCGTGTAACGGACTATCTTTTTTGTTTTTGAAATTGATGAATCTTATTGTTGTTTTTGTTTTTTAGTTGTCTAATATTGTTCTCTTTGT GATGATTTTATGTTTTTCTGTTATCTGTAAGATATTGTGAATTTGCAATAGGCCTATTATTAATTGGTAAAGTACATGGTAGTTGAGGCTTGAGACTAGG GACATGGTGGAACATGAATACGTGGATTTAGAAAAAACTCTGAGATTGGTGGTTGTAGTTTATATCTGGGAGAAACTTTTGCACTGCTGCATTTAAGACA ACCAATATAGGGTCTCTTTTGGTGTCATTAAATGTTATAGTTTTGGTGCAACATTTTTCCATAAGGTTGAGAAACCGAGCTTAAGTTTAAAATATGTATC GTGACAATGTAAAGTTTTTTATACTATCAATACATCATCCATCATTGATTTGTATTTAATTTAGAAATTTTATAGTTTTATTTTAATTGTGAATTATCTA ATACGACTTTCACCTTTATCCTACTTTAAAACTGATTATATATATCATCAAACACAGGTATATGAAATGAATACTTCACGTGTTATATGTGATAGAAAAG TATTAGCGAAACTTAAGGGAAATTTTTACCACACAACTATAAGCCTGCAGTGTTATATGAGATTTAATGTTGAAAAGAAGATAAATTTCACGAAGCAGAG ATGAGAATATTGGTTAGATGAGTAAATATAATAGACAAAATATGGTTAGAAATGAATGCATTAGGAAGAGAGTTGAAGCATCTCCTCTTGTAGAAAAGAT GGTAGAGTTACGCCTTAAGTGGTTTGAACATATGTGGAGGAGACCGACAGAAGTCACTCTAAAAAGAATAGATCAAATGAAGGTTAATGTAATTCCTAGA ATAAAAGAGATCAAGAAAAACCATTCGCGAAACTATAAGGAAACATTTATAGATTAATGCTATGTCAAAAGAACAAGATTGATGAGAGTAATATAATATT GTTCGATACATTTAGCTGACTCCATGTTGTTTCGGTTGTTGTTTATATTCACCATCAGATTATTAGTTGGTGTAGATTATAATGGGTTATAGACGCCCAA CTTGCACAGAAAATTTCATAAACTTTTGTACTCAAAATGCAACAGTTCCCTTATTTTCAATAGAGTTAGCCATCAAGACATTAAGTAAGATAAAAGTGTT CTAAAATCTGATGGAACTTACAGTTCAGTGTTTTTTTGTGTACATAGTAGTTCAGTGCTGGTTATTACTCCTTCAAGTTCAACTAAATAACTATATGAAT TTTACTTGCTCATTCTTTCTTACTCTTTTTGCATCACATGTACTATCATGTGCAATGAAATCTGTACATTTTTCTTTACCATAACCTTTAAAACCCATCT ACTTATTTACAGTTCTATAATCCTGTTTTTGGTATTGACATTTTGGTGCAATGAATGATCATTTTACCTGATATGCTTTGTCACTAATATCAATCCCTTT ATGCTTTGTTGTTTTGCAGACTCCATCAGATGGACTGAAAATAAAAGAGGTAAGCTTAGTCTAAAGTCTAAAACAGTTTCATATAATTTATGTTTCTTCT GAGGAGTTACCTCAAGAAATGGAGTTTGGCTTACTTATACTATGAATTATCATCAATGCCACCTTGTCGTTGTCCGGTTTTTCTGTTGTTGATGTAATGT GTTATGCAACAGTCATATGAGGTGAACTCAAATGGCATAGAAATCTTCTGCAAAAGTTGGCTTCCTGAGGCATCTAAGCCGAAAGCAGCGGTGTTTTACT GTCACGGTTATGGAGACACTTGCAGTTTTTTCTTTGAAGGAATAGCTAGAAAGCTGGCATCGTCTGGATACGGTGTTTTCGCTATGGATTATCCGGGTTT TGGTCTTTCTGAAGGTCTCCATTGCTATATTCCCAGTTTTGACGAGCTAGTTGACGATGTCATTGAGCATTACTCCAAAATCAAAGAAAACCCGGAGTTT CGTTCTCTTCCGAGCTTCCTATTTGGACAATCTATGGGTGGAGCTGTTGTGTTAAAGATGCACCTGAAACAACCTAACGCTTGGGATGGCGCCATTCTCG TTGCGCCTATGTGTAAAATTGCAGATGACATGGTTCCACCAAAGTGGCTCACTAAGATCCTCATTGGTATGGCTAGCGTTCTTCCGAAGCATAAGTTAGT TCCACAAAAGGATTTAGCAGAGGCAGCATTCCGAGAGCCGAAGAAGAAGGACCAGGCAGCCTATAATGTTATTGCTTACAAGGATAAACCGCGCTTGCTG ACTGCTTTAGAAATGCTTAAAACTACCGAGGAAATAGAACGACGATTGGAAGAAGTCTCTCTACCATTATTAATCCTTCATGGTGAGGCTGATACTGTGA CTGACCCATCAGTGAGCAAGGCCTTATATGAAAAAGCTAATTGTTCAAACAAGACTCTTAAGCTATACAAAGATGCTTATCATTCTCTTCTGGAGGGTGA GCCTGATGAAACAATAGTTCAAGTTTTTGATGATATCATTTCTTGGCTTGATAAGCACAGTTTCAAAGTTGAAACATAGTTAATCTTCTTCTTAATAGTG ATCATTTTTTTCTATCTCTTGTAATTCAAAAGAAGAATATTCAGATTGGTTCAGTGAAGGAATAAAAATAAATAAATGTTGCTTATGCAGAAGTGGCTTA TATTTGTTCTTTACATTTTAGCAGATGTAGTCTTGTGTGAACAAAATGTATATTCTTTTACATAAGAATGAAATAAAGATGAGAACAAAATGTATATTCT TTTATTAATTGTTTTACTAACTTAATGAGTATTCTTTTTCTCCCTAAAGTTAC
• Tissue: pods
• Gene name: LI_gene_160668;
• Additional information: details;

Expression of Ll_transcript_440091

FPKM

• PAB: 17.2
• PNAB: 5
• PS1: 8.3
• PS2: 2.2
• PS3: 5.5
• PW1: 2
• PW2: 2.8
• PW3: 3.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_440091

• Blastp: Caffeoylshikimate esterase from Arabidopsis with 36.68% of identity
• Blastx: Caffeoylshikimate esterase from Arabidopsis with 36.68% of identity
• Eggnog: alpha beta hydrolase fold(COG2267)
• Kegg: Link to kegg annotations (AT1G52760)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428652.1)
• Pfam: Serine aminopeptidase, S33 (PF12146.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;