| Id Trinity | TRINITY_DN48387_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_440112 |
| Sequence | TTTCAATTTTCATAACAGCTACTGAAATTGAAGGAAAGATTGAAAGAGTGAAGAAGAAGAAGAAGAAATGGGAAAGGACGCAAAAGCAAAGTTATCAAGT TTAGTTCACGAACTCAAAGAACACATAGCATCAACATCAACATCATCATCATCATCATCTTCTTCAGACGGCGACGCTTTGGTGGTTCGGTTCCGAACCG TTCTCCCGAACCTCCTCCACACCTATATCCACCCTTCCTCCGCCAACGAGAGAGAAGTTATCGCCGTGCTGAAACTCATATCTCACACCGCCACCAATTT CCCTCGTGTTTTCTACCATTCCACCGCTTCTTCTATTTTACCTATTATTGCTCACATTTTCCCTTTCTTTCTTACCCCTCCTTTTCGTTCTCGTCATCCT CTTTTCTTTCAAACTCTCTCTTCTCTTCTTTCTTTGCTTCGATCCCTCTCTCGTGATTCTTACATTCACTTCTTCCTTGATTCCGTGTTACTCATTCAAG ATATTTTACATGTGGCTTCACTGCCTTTACACAACGCGGGTGAGAATGGATCATCTAGGGTGACATTGAAGTGCTTTTGTCGGTTATTCTCTGGGGTGGA AGATATCCCGTTGGCTAATAAACCTGGGGATGGATGTGGTTTATTGGTTGATCTTACTGGCGAAAGCCGATGGCAACCTTTCGCTACTTGGATTTTAAGG CTTATTAGTAAATGCATAACGGAAGGGACACTGAGTGTCAAAGGGTTGATCAATGCGTCGTTTGTTCATGCTGCGTGTTCTCTTTTATGCTATGGTGATG CTGATTTGCAAATGGCATGCTTTGACTTTGTATACATTCTCGGAACGGTGACAGACTATGATATCATTCCGTATCACAATTTAATCCTAACAATATCTAC TATCTTGAATCTGGACAAGGAGGGGTTTCCTGTCTTCAGAAACCTGGCATATGATTCATCAATGGGTATTTGCCTCAATTTGCTTTACTCTAACTGTACA GAAGATGTTGTCAAGTTAACTGCTGCTGATTTAGTCAGTGTATTCCTCCAATCAACATGGAGAACCAAAAGCCAGGAACTTAAGGTTGCACTATTCAGTG CCTATGCTAGGATTGCTCAAGTTTGCCCCCCTCATATCTGGAAGCCAGAATATCTCATTTCTGTACTCTATCATCCAGAACCATTATTGCCTGCCCTAAT AGACTGCTTTCAAGTAGCTCTATCTACTCTCGGTCCGAGTCTTGTTGGGGGAGTCCACAAAAACAAGTTGTTGACCATGTCATCTGAAGATAAGTCAATT GAAAGCAGGACACTTGGCCAAAAGAGACCCGTCCAGGATATGGATAATTTAAAGATCAAGCGACAAAAAATAAATGAAGAAATTATTGTTGCAGATGCAA GTGTTGAGGTGGAATGCAAATATACTCATTTAGTTACTCTTCAATTGGTGAAAGATTATGCTAACCATATGAATAAATCTCTTCTTGCATCTGTTCAATC ATTAAATGCTCCTACTGTCGAACATAGTTCTTTGAAACCAGCTAATGCATTGTCTGCACTTAGCAAGCTATGCATTGCCTTCTCTAGTTATCCAGAGACA CATCTGTCACTCAAAATTTTCCAGCAGATGCTTGCATGGCTTCCCTGGATAGTTGAGCAGGCAAAACAAGGGAATTCGATCACGGTTGATATCTCCACCT ACCTGGAAGGACTTCACAGTGTATTGCTATCACAGGGTGCCTCTTTCATTGAGAACAACCTATTACAATATCAAAATAACTGTGCAGACCTTACACATGT AGTGCTTAAACTTCCCTGGACTCATATGCTTCTTGCTGCTGATAGCAGTTGTCAATGGAAAACAAAATGCCTTTCTCTTCAAGTAGCATCCAAGCTAGGC CCATGCTTGAACATTGAAATTGTTCTTGAAATTTTGGATTTGGGTCTTCATGATGAAGCTGAAGAAGTCAGAATTGAAGCTGTCATTTCCATGCCAGTGC TGCTTTTGTGGTCTGCTCACGATGTATCACCTATCTTTAAAACACTGGAGTACTTAAAGAGAGATGATGAGAAGGTTAAAAAAATTGTTCCCATATCTCT TGGCCTATTGTCATGCCTTTATGGATGCAGAAGATCTGGAGCAGGTTTACATGTAAATGAATGCAAATTATTTCTAAACATGAACAGTGGTAAACCATGT TGGACGATAGATCAATTACTTCAAGGTTTCAACTGTTCTAAATGTGACCAACAAGTTATATACAATCATGATAAGCAACATCCTCAAATCACTCATCGAC CTGATATGCATGGAGCAGATGCAGATCTTAGTTTGGACTGTAATTTCATCCAACTACAGACTTTATTTTTTGAACTTCTTTTTGATGAGTCATCAGAAAA TGTCCAGATTTCCTGTGTGAGAGTTATTCATCGGATTCTTGCACATGCAGCTGCTGATATTCTGCTCAAAACGAGATTTGAGTGGATAAAATGCGTAGAA TTTTTTCTGATTAGTAGAAGCAAGGAATTAAGAGAAGCATTTTGCAGTCAGATCAGTTCCTTTGTTGATAACCATATTTTGAGTCTAATTTTTTCTGGAG GCACTGACAAAGGTAAAGAACAAAAATTCTTGGATGCAATTAAATATGCTGTGGCAGTGGCTGAAAGTCCACAAATATTAGAGACACTACTGGAATGTAC TGCAGAAATAATGGTTGCTGTTGATATAGATAGTAAATTGTTCCTGTCTTCTCTTATATTGTTAGTTGATCAGCTTGACAGTGTACATGTGACTGTAAGA GTCAATGCATCAAGGTTAATACAGAAATCTTCCTGTTCCCATCTTAAAGGAGGACTTGAGTTAATTCTTGCTAAAGATGTTCATATTCGTATAGAACTGT ATGATTATCTCTCTGAGAGACTCGCCAGCCGCCCAATCTTAGTGAGGGAATTTGCAGAAGCTGTTTTAGGCGTTGAGACTGAAGAGCTTGTCAAGAAAAT GGTTCCTTTTGTTCTCCCAAAGCTTGTGGTGTCTCAGCAGGATAGTTCTCAAACCCTTGACACCTTATATGAGTTGGCCAAGTGTTTGAATACAGATATG GGGTCTCTGATAGTTGATTGGCTGCCAAAAGTACTTGCTTTTGCTCTACATCAAGCAGATGACCAGATGTTACTTTCTGCCGTGCAGTTTTACCATGAAC AGATTGGTTCTGACAAGCAGAAAATATTTGCGGCTGCATTACCGGCTCTTCTAGATGAACTTGTTTGCTTCACAGACGTTGGTGATTCAGATGAGATAAG TAGAAGATTAGCCAGAGTGCCTGAGATGATTAAGGGAATAGCTAAAGTTCTAACAGGTGGGGAAGATCTTGCAGGGTTTTTGAGAAATCATTTTGTTGGC CTTCTGAATGGTATAGACAGAAAGATGCTCCATGCTGATGATTTTGTGCTTCGGAGACAAGCGTTGAAGCGTATTAAGATGCTGATTAGAATGATGGGTT CTCATCTGAATACTTATGTGCCAAAGTTGATGGTTCTTCTCATGCATGCTATAGATAAAGAACCACTACAAAAGGAAGGTCTCTCTGTCTTGCATTTTTT CATAAAGCAATTGGCTAAAGTATCGCCATCTAGCATTAAGCATATAATTTCTCAAGTTTTTGCTTCCCTTCTTCCCTTCTTGGAGAGAGACAAAGAAAAT CCTTCGATGCATTTGGACAAAGTGGTAAAAATTCTAGAAGAACTTGTTTTAAACAACCGGATTATCCTAAAACAGCATATATCTGAGTTCCCTCCATTGC CGAGCGTTCTTGCTTTGGCGGAAGTAAACAAAGCAATTGAGGATGCACGTGGGTCAATGACTTTGAAGGATCAATTACGAGATGTAGTTGACGGTTTAAA TCACGAGAACTTAAATGTGCGGTACATGGTAGTGTGTGAGCTTCGCAAGCTTCTGAACATTAAATGGAAGGATGTTACAGCTCTAATAACTGCTGAAGCT GGTTCAGATTTGGATGTCTTAAGTTCTTTGATCACATCATTATTCAGAGGATGTGCAGAAGAATCAAGGAACACAGTTGGGCAGCGATTGAAGTTAGTTT GTGCTGATTGTCTTGGAGCCCTTGGTGCTGTTGACCCTGCTAAAGTAAAAGGTTTTTCATGTCAACGTTTCAAAATTCAATGCTCTGATGATGACCTTAT ATTTGAGCTGATCCACAAACATCTAGCTCGGGCATTTAGATCGGCACCCGATACTCTTATTCAAGATTCTGCTGCATTAGCTATACAGGAGCTTCTAAAA TTTGCTGGCTGTGAGGCATCACTTGATGAGAATGCATCAACTTATACATCACAGGCACAAAAGGATGGGGATGATAGATGTGGTGTTGCATCTAAGATTA AGAGTACTAATGGGATGAATAATAGGGGTCAGAGATTATGGGATCGTTTCTCTAATTATGTGAAAGAGATAATAGCCCCATGTTTAACATCTAGGTTTCA GCTCCCTAAAGTATCCGATTCAACATCTGCTGGCCCGATATACCGCCCATCTATGTCATTTAGAAGTTGGATATTCTTTTGGATAAGAAAACTGACTGTT CATGCTACTGGATCTCGTGCAAGCATCTTTAATGCTTGTCGTGGAATTGTGCGCCATGATATGCAAACAGCAACATATTTACTTCCATACTTAGTTCTTA ACGCTGTTTGTCATGGTACTCAGGAGGCACGTCACAGCATAACCGAAGAAATCCTATCTGTTCTTGATGCAGCTGCATCAGAGAACAGTGGTGCTTCAGT TCATGGATTCAATGGTGGTCAAAGTGAAGTTTGTATTCAAGCCGTGTTTAATCTTCTTGATAATCTTGGACAATGGATGGATGATGTTGAACAAGACCTT GCCCTTTCCCTTTCTCAGTCATTGGTTTCTAAGCAACAAAAGTCAAAAGATCAAAGTTCAAATTCCTTGACAGATCAGGAACAGCTCCTTGTACAGTGTA AATATGTTTCAGAGCTTCTATCTGCGGTTCCAAAGGTGACTCTTGCTAGGGCTTCCTTTAGGTGTCAGGCATATGCAAGGTCCTTCATGTACTTTGAGTC TCATGTAAGGGGAAAGTCAGGTGCTTTCAACCCTGCTGCTGAGAGGAGTGGCGTCTTTGAGGAAGAAGATGTTTCACATCTTATGGAAATATACAGCTGT TTAGATGAGCCAGATGGACTGTCTGGTTTGTCATGTTTAAGTAAATCTTTGAGGTTACAGGATCAGCTATTGATAAACAAAAAGGCTGGGAACTGGGCTG ATGTTTTAACTTTCTGTGAACAGTCTTTGCAGATGGAGCCAACTTCAGTTCAAAGGCATTCTGATGTCCTTAAATGTTTACTAAATATGTGCCACCTTCA GGCTATGGTCACTCATGTTGATGGTTTAATTTCTAGGATTCCTAGGTACAAGAAGGAGTGGTGCATGCAAGGTGTGCAGGCAGCCTGGAGGCTTGGCAGG TGGGATTTGATGGATGAGTACCTTAGTGGGGCAGAAGAAGAAGGTTTAGTTTGTAGCAGCTCTGAAAGTAATGCTTCATTTGACTTGGATGTTGCAAAGA TTCTCCAGGCAATGATGAAGAAGGACCACTTCTCAGTTGAAGAGAGGATAGCATTATCCAAGCAGTCACTAATTGCCCCCCTTGCTGCCGCAGGCATGGA CTCTTACATGCGTGCGTACCCATTTGTGGTAAAACTTCACTTCCTACGAGAGCTGGAGGAATTCCATTCTCTTCTGGGTGATGACTCCTTTTTAGAGAAA CCATTTCGTGTAGGTGATTTAGGGTTTGCTAAATTGGTGGATAACTGGGACAATCGACTCCGATTTACACAGTCATCACTTTGGGCTAGGGAGCCTCTCT TGGCTTTCAGGAGGCTGGTTTTTGGTGCAAGTGGTCTTGACGCTCAAGTCGGCAATTATTGGCTTCAGTATTCAAAGCTATGTCGCTCGGCTGGGCATTA TGAAACAGCCAACAGGGCAATATTGGAAGCCCAGGCGTCTGGTGCACCTAATGTCCACATTGAAAAGGCGAAACTTCTTTGGAGCACACGACGGTCTGAT GGTGCCATTTCTGTCTTGCAACAATCTCTCTTGAACATGCCTGTTGAGATTTTAGGCTCTGCTGCAATAACATCAATTACTAGCCTTTCCCTCTTGCCAC TTAACCCCCCACCTATTGTCTCTGAAAGTCAAACTGTAAATGAGAACATAGATATTGCAAAGACTCTTCTTCTGTACTCAAGGTGGACGCATTACACTGG GCAAAAACAGAAGGAAGAAGTAATAAGTCTTTATACCAGGGTGAGGGAACTGCAGCCAAAATGGGAGAAGGGATACTTCTATGTGGCTAAGTATTGTGAT GAATTGCTTGGGGATGCCAGGAAACGCCAGGAGGAGAATTTTGAGCTCGGTCCTAGATCAGTTTCTTCAGCAATTGCTGCTGCTGGCTCTTCAAACTTGA ATGGTGAGAGGCGTTGGTGGTCCTATGTTCCCGATGTGCTGTTATTCTATGCAAAAGGACTTCACAGGGGACACAAGAATCTATTTCAGGCACTTCCAAG GTTATTAACCCTGTGGTTTGATTTTGGTAGCATTTATCAAACAAGTGGTTCATCCAACAAAGATTTAAAGAATGTGCATGTGAAGGTAATGAGTATTATA AGAGGCTGTTTGAAGGATTTACCAACATACCATTGGTTGACGGTGCTTCCTCAATTGGTTTCAAGAATTTGCCACCAGAATGAAGAAATTGTTCGAGTGG TCAAGCTCATCATTACCTCTGTTCTCCGCCAGTATCCACAACAGAGCCTATGGATTATGGCGGCAGTTTCAAAATCCACTGTTCGTTCTAGGCGGGAAGC AGCAGCTGAAATCATACAAGCTGCACGCAAAGGTTTCAGCCCGCGCACTGATGAGAACAGCTTGTTTGTTCAATTTGCTAGCCTTATTGACCATCTGATC AAATTATGCTTCCATGCTGGCCAGTCAAGATCGAAGACAATTAATCTCTCAACTGAATTTAGTGCTCTAAAGAGGATGATGCCCCTGGGAATTATTATGC CAATTCAGCAATCTCTTACTGTTAATCTACCGACATATGATGGAAATCCGGGCGATTCACCTATGTCTAATATCTTTTCTGCCACAGATCTTCCTACTAT ATTAGGCATTGCTGACGAGGCTGAAATTCTTTCATCTCTACAGCGACCTAAGAAAGTCATTCTACTAGGCAGTGATGGCCACGAACACCCATTTTTATGC AAACCCAAGGATGATCTCCGCAAAGATGCCCGCATGATGGAGTTTAATGCAATGATTAACAGGTTGCTATCAAAATATCCTGAAAGTCGTCGAAGGAAGC TATATATTCGCACATTTGCTGTGGTTCCTCTGACGGAGGACTGTGGTATGGTAGAGTGGGTACCCCATACTCGTGGACTTAGACAAATTCTTCAAGACAT CTATATTACCTGTGGAAAGTTTGATAGGCAGAAAACAAATCCTCAAATTAAACGAATTTATGATCAATGCCAAGGGCCCGCGTTGCTTATGCTCACACAA CTGCAGTTTGGTCAATGGTTGGTCACATTGTGGGGCTGGGTGATCGGCACGGTGAAAACATTCTTTTTGATTCTACCAGTGGTGATTGTGTTCATGTTGA TTTCAGTTGCTTATTTGACAAAGGCTTGCAGTTGGAGAAGCCCGAGCTTGTTCCTTTTAGGCTAACACAGAACATGATCGATGGCTTAGGCATCACTGGA TATGAGGGTATCTTCTTGAGGGTTTGTGAAATTACACTTTCAGTTCTGAGGACACACAGGGAGACTCTCATGAGCGTGCTTGAAACTTTCATTCACGATC CTCTTGTCGAGTGGACAAAATCACACAAGTCTAGTGGAGTAGAAGTTCAGAATCCACATGCACAGCGCGCTATTAGTAATATTGAGGCAAGGTTACAAGG AGTGGTTGTTGGTGTTGGGGCTGCACCATCATTGCCTCTTGCTGTAGAAGGTCAAGCTCGTAGACTAATTGCTGAAGCAGTCTCTCACAAAAATCTTGGA AAGATGTACATCTGGTGGATGCCTTGGTTTTGAAGAATTCGATGAATCGATAAGATCTTCTCATAACAATTCAGTTAGGTATGACATCATTAGTTTCACA TCCTCAATGCATGGCGTCTATATACAGAATGGAAGTAATCTAGAGATTGAACCAGCAAGCAGAGGAAGGAAATAGGAATGGTTCAATATGATCTTTTTGG GCAAAGGTAACCTTTGACTATGGGGATATCATAAAAGAATGTACAAAGTAGATTTTTGGTGCTGCTACAGAATGTATTTGGACCTGAATAGGCAAAACTT GGTGACACAAAAGATTGAACTTCAACATGACTGACAGAAATTCATCCCATAGAGTTGTATATATAATGGTTGTATTCCCTTGTAAATGATGAATGTATAA AATGCCATTACTCCTTCCATATGATATAGTCCAATGCATATAAATCTAACGTAGTTTTATCTTTCTCTCTTGTCCTGTCATAGTTTCATTTTTAAAAGTA ACACCTTCTGAATTGAACTTATTATTCACAAAAAGAAAAGCTTGAATTGTTTGATTGTTTTAATGTATTTAGCTTCTAGTTTCTATTCAACCCAGATGTA ATTCCCTTTCAATGTTCAGTCCTGCGTACTTTAAGAAACTCATGGTTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_160673; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_440112
| Blastp | Serine/threonine-protein kinase ATR from Arabidopsis with 61.49% of identity |
|---|---|
| Blastx | Serine/threonine-protein kinase ATR from Arabidopsis with 61.16% of identity |
| Eggnog | phosphatidylinositol kinase activity(COG5032) |
| Kegg | Link to kegg annotations (AT5G40820) |
| CantataDB | Link to cantataDB annotations (CNT0002379) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441707.1) |
| Pfam | UME (NUC010) domain (PF08064.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |