Id Trinity | TRINITY_DN48390_c1_g2_i11 |
---|---|
Name Transcript | Ll_transcript_440749 |
Sequence | AGAAATTTGAAATTGAAAGGTTGGTTCAGATGTTTGATTCTGTCTACTACTTTGTTCACTAAACAACAAAAACATCTGAACCAACCTTTCAATTTCAAAT TTCTCTCTCTTTCTCAACCACATTTTTACCTTCTACTTTTTACATTTGAACCAACCTTGTCACAACCACAACCTTTCAATTTCAACTAATGTTCCTAGAA TCATTAGATACAGAATCATGGAGCAAGAACAAGCTCTCTCTGTTTCTATTTCTGATTCTGTTTCTTCTGAAAATGTTTGATGCAGTTATCTTCTTTGGTC TCAGTTTGGCTCTTGGAATAGCTCGCAGGACCAGAATTCCTTATACTGTTGCCCTTGGATCTTTAGAATATGGTACTCATCATCCGCTGAGAAAGATTGG GGCTGAAATTCGTCTTTAACTGCGAATGCATGTGATGGGAGAAGCTTTGAGCACTAACATAAGAAAGCTTTGAGCAGTGATAGAAGAAGCTTTCATGGAA GAAGAAAAGAGATGAAGTGAGTTTGGAGGGAGGGAGACTTTGGTTCGTATTGGAAAAGAGACTCTGATTTTGGAGTGAGGGAAAAATAGAGTTCATCTAG CAAATCCGCAGAGTTGACTCCAGAAATAGGAAGACTGATGAAGTGGTGTTGCTACTGCTATTATCAATGAAAGTCTTGTAGAAGGAGAAGAGGTAAGGAG GTTCCTAGAAGATGTTTGTATAACATACCCTCAGGTTTGCGTATTACATTAAACCTCCAAAGTTTTCTGTTTTTATTTTAAAATGTGAAATTGAGATGCA ATTTAACTTAATTTGACTTTTATTTATTCTATGAATAGTTTTCTGTTTTTATTTTAAAATGTGAAATTGAGATGCAATTTAACTTAATTTGACTTTTATT TATTCTATGAATGTCTAATTCTCATGTTCTGCATGTTGTAAAAATAAGGCAAGCACAATATTCAATACTAAATTATTTACTTGAATATGTTCAAAAGCTT GAGAAGGTTGGAATATTGGAAGAGAAAGAGATACTACACCTTCACAATGCTGTCCATGTATTTGCTTATGATATTCATATTTCTTTGCTTATTTGTTGTC TTTATAGTGACTCTTATGAAAATTAAAATTGGCTTGTTCATATTTTAATGGAATTTTTTTGTTTTCATCCCGATTTAAAGAAATTGCTTAGAAATTCTCT TCTAGTGAAGCTTTCTAAATAAGTACTTTACATCCTATGTTGGATGCTCTTCCATATTCGGTTCGTGAAACACATGTATGTAGTACCAGGGAAATGACAA AATAACATGGTTTGATACTCTACAAGGAAAGAGTCACATTAAATGGTGTTTGGTTAATTTCTAATGGAGTGAAGTAATAAACTCATTTTTGCAGTATGAA GCTTACCATATAATATCTGATTGTGAAGTTGTTGAAAATTGTTGTTTTTCCAATGGGAAAGCAAGAAGATAAGAAACACGTGCCCTTTGTATTCAACGTT CTCATACTGGAGCACAAGGCCGTTATGAAATGCTAACTAGAAGACCATATATCTGTGATGTCATCACAGATTCCGTGGTATGCTTTTCATAGAAGGTGAC AAGATATTTCAAGTCTCAAAATGAACCCTTGAGTGGAAGATTTCATATGGCAGGTATGGTCACATAAAATTTGGTTGTTGTTATTTCTTCTCTTCCCTTA ATGGCTTCTGATTGCTTCTGACTGTATTCTGAACTTCCAGCTTATATAGTAAATGAATTTCATAAGTCTTTGCAGAAGAATGTGGATCATGTTTTTCATT TAAAAAAATTATTCTTTAAGATATCAAGTTCATTGAGGATATCTTAGTTCATGAAAAATTATGTCTTGTTGTGCATGTTCGGTTGAAGTACACGACATAG AAATGGTAGATGATAAATATATTCAAAATTATAATGATTATTTTCAAAATTATAATGAATATGTTTTGCTTTTGCACTAATTTTATGATAATTTGTAGAA AATTGCTATTTTTCTTTCTAAACTATGGCTACCTAAGATATTTGAGAAATTGGCCACATGCAAGATTTAAGGGCTCTTGTTGCTAAATGATTAGTGATGG CCACACATGTAAGAGGAGAAACAATACAAATCCCTTACCATCCGGTTGCCTTCTTATTAGAAGGATATGTCAAAACTCAAGATATTCAAGACACAACTTG ATGATTTCACATGGGAATCTAAGCTTCCAAAATTTAATGATTTCATATATTTTAAATTTAATGTGTTAATATGTTTCTCTGTCTAATATGTTTTTACCAA GTTAGCATTATGAATGCGGGGTAAGGAAACATATTAGACATGAAAACATATTAACGTATATCTAATTTAGAATGCCTGAAATCATCAAATTTTGGAAACT TAAATTCCTCCATGTGAAGGAAGCAAAGTTGTTGGTGATGGTACCAACTCTTGAATGCCTTGAGTTTTGACATATTATTCTAATAAGAACTCAGCTGAAT GATGATGGATTTCTATTGTTTCTCCTCTTATGTATATGACCATCACTAATCATCCAACAACAAGAGCCCTTAAATCTTGCCTAGGCAATTTCTCAAATAT CCGAGGTAGCAATAATTTGGAAAGAAAAATAGCACTTTCCTGCAAATTATTATAAAATTAGTCCAAAACATATTCATTATAATTTTGAACATATTTATCA TCTATCATTTCTATGTCATACACTTCAACCGCACATGCATAACAAGACATAAATTTTCATCAACTAAGATATCCTCAATGAATATGATATCTTCAAGAAG AATTTTTGAAAATGAAAAACATAATCCCCATTCATCTGCAAAGACTTATGAAATTCATAGACTATATAAGCTGAAAGTTCATAATAAAGTCATAAGCAAT CAGAAGCCATTAATGGAAGAGCAATAGTAACAATAAACAATTTTTATGTGACCATACCTGCCAGATAAAGTCTTCCACTAAAGGGTCTATTTTGAGACTT GAAACTATCTTGTCAATAGCTTCTATGAAAAAGAATTGAACCACAAAATCTGTGATGATATAATAGATGTTTGGTCTTCCGGTCAACATTTCATAATGGC CCAAAGGGTGCTTGTTTCTTATCATATTAATAATCGAATATTATATGGTAAGCTTCATATGGCAGAAATGAGTTTATTACTTCACCACTCCATTAAAATC AACCAAATACCATTTGATTTGGCTCCTTCCTTGTAGAGTATCAAATCACGTAATTTCGTCATTTCCTTGGTACTGCATACACATGTTTCATGAACTGAAG ATGGAGGAGCATCCAACATAGGATGTAAAGTACTTATTTTAGGAAGCTTCACTAGAGGAGGAGTTCTAAGCAATCCGATTTTAATTTTCATCACTATAAA GACAACCGATAAACAAAGAAGTATGAATTTGAGAAGCAAATAAATGGATAACATCATGAAGGTGTAATATTTCTTTCTCTTCCAATATTCCAACTTTCTC AAGGTTTTGAACTTATTCAAGTAAATGATTTAGTATTGAATACTATGCTTGCTTTTTAAACATGAGAGTTAAACATTCATAGTAAAAATAAACCCAAATT GAGTAAAATAGAATCTCAATTTGACACTTTGAATTAAAAACATAAAACTTTGGAAGTCTAATGTAACACGCATACCTGAGGGTATGTTATACAAACATCT TCTAGGGACTTCGTCGCCTCTTCTCCTTCTACAATATTTTCATTGATAACAGTAGAAACAACACCACTGTCACCTAAAGAAGAATTTGGAAGAAATGAAT ATAAATTATTCTAATTATATTTACAACCTTAACCAATACAATGCTCTAACAAACTATATAACAACCACATTAATGGTCTGTTTGGACTGAAGGTTTTAGA GGGAAAAGAAAGTGAAGACATATTTATTGATAATAGTATGATTCTCTTAATTTAATAAAATAAAAATATGCTTTCCCTTTCCCTCTCTAACTCTCAATCT CAAAACATGCCAAATTGGATTTATGACACAAATTGAAGATAGAAACAAAAATATAAAAAGGAATGCATAAAAATGGAAAGAGTCTGTCTATTACCAATAA AGTCATGGAACAATCGTCGAACAATTTTGTGGGCACGAAGAAATGCAGGACATATATAACATGTAGATCCAACTTTTCCACGATGAAGTACGTAACTAAA TTTGTTGGGAACATACTTGACTGAAGAAAGTTGTAGAAATTTAGAAAATGGACATTATCTTTTAAATCTTTCTAGTCACATAGAAGCTCATGTGAAGTTA AATCTATTGCTTCATCGATTGACAACATTATGATATTAACTGTTTGAGAAATTCTTCCTTCATCAAATATCTCCTCGTAAGTAGATTGAGCACCTAATAC AGCAATAAGTTCTAAAATCAGTCATAATAATATAGTTGATGAATTCAAGTTCATAGTGCTACTACACAAACCTTCATGACTCAACAAATGCAACTTTTTT ACTTCAAGTGCAAACACACATCAATGTGAGAATAGTAGTGAACATAATAATAATTTAAGTGTTTAGATGAATACAATCATAATTGATAAGTGGATTGCTC TTACCACCATAACAAATCTCCTATGAAGCACCCATACCGATACTTG BLAST |
Tissue | pods |
Gene name | LI_gene_160696; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_440749
Blastp | - |
---|---|
Blastx | Sodium/hydrogen exchanger 7 from Arabidopsis with 31.4% of identity |
Eggnog | Sodium hydrogen exchanger(COG0025) |
Kegg | Link to kegg annotations (AT2G01980) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460034.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |