| Id Trinity | TRINITY_DN48399_c2_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_439544 |
| Sequence | AAATTTATGGTTTGTATTTATTAGCAAGTTGAAAATGGCTTGCCAACAAAAAGAGGAATAAGGATCTTCTCTATATTGGAGAGGGAGTTCTTATTTCTTC TTTTGTTTTCTATTGCATGAGATTAACGAACAACAAGTTTAACAGATTAATTTAAATCACATACAGTTTTAAGTTGTTCCTTAACTCATTTACTTCTATA TAATTAGGACTTGACAAACTTATATGTTAGGTTACTTAATCAAATGTCCACCATGAAAAGTTTTTTGCCACATATCTTTTCTTTTGCTATTTGTCTGTTC TGTTGCTTAGTTAAGGTACCACATGTTGATGCTGCAAACGCAGCTACAGATCCTTCTGAAGCGAGGGCGTTGAATGCAATCTTCAGCAAATGGGGCATAT CTGCAGACAAAACACAATGGAATACGAGTGGTGATCCTTGTAGTGGAAAAGCCATTGATCCCACCACCACCATTGATGACTTCACTTACAACCCATTCAT CACATGCAACTGTTCTTATGTCAATAGAACTGTTTGCCACATTACAGCACTGAAGGTTTATGCATTGACAGTGGTTGGTGAAATCCCTGAAGAGCTATGG ACTCTAACTCACCTCACCAATTTGAATCTTGGCCAGAATTATTTGACAGGATCTTTACCCACAGCCATTGGAAATCTAACTCATATGGAATACTTGACTG TTGGCATTAATGCTCTATCAGGGGAGCTTCCAAAGGAATTGGGGGATCTTACCCACTTAATATCTCTAAGTTTTGGTTCAAACAACTTCTCAGGATCTCT CCCATATGAACTTGGGAATCTGATAAAATTAGAACAACTATGGGCTACAGACATGGAACTCACAGGCAGGATACCCGACTTCATAGGGAATTGGTCTAAG CTTCAAAAGTTGAGGTTTCAGGGTAATTCTTTTGAAGGCCCAATACCATCATCATTTTCCAATTTAACTTCTTTGACAGAGTTGTGAGTGCTGTCACTAG TTTCTTTAATGGATGCTGCTGATTCATAAAATCTCATATATAACCTTCCATACAAATTTAGGAGAATAAATGATTTATCTAATGGGAGCTCCTCATTGAC ATTTGTAAGGAATATGAAGTCTTTGACTGTCTTAGAGCTAAGGAATAACAATATTTCTGGTTCGATTCCATCCATCATTGGAGAATTTCAAGAATTGAGC CAGTTGGATTTAAGCTTTAATTCTTTGACTGGAGAGATTCTAGAATCAATTTTCAATTTGAGTTCACTCTCTTACTTGTTTCTAGGAAATAACAAACTTA GTGGGACTCTCCCCACACACATAAGTTCCTCTCTTCTCAATATAGACTTATCATACAACAACCTGACAGGGAGCATCCCCTCTTGGGTAAACCAACCAAA TTTACAACTCAATGTAGTTGCCAACTACTTAACAATAGAAAGCTCAAACAGCAGTGGTTTGCCTGGTGGGCTCAACTGTCTCCAGAAAAATTTTCCGTGC AACAGTGGTACTGGAAGATATTCTGACTTTGCAATCAAGTGTGGTGGTCCCCAATTTACTGCCGCAGATGGAACTGTGTACGAAATGGACAATGCGACAC TTGGTCCAGCTACATACTTTGTTACTGATACAAAAAGATGGGCCGTTAGTAATGTTGGATTATTCACTGGGCGATCCAATAATGTATTCAAAAGTTCAGT GGTATCAGATTTCTTCCAAACAGCACGACTCTCTGCTTCGTCACTAAGATATTATGGCTTGGGGCTAGAAAATGGTTTTTACAACATCACCCTCCAATTT TCTGAAATAGCCATTCTGGATTCTACTACTACTACGTGGAAAAACGTTGGTAGACGGGTCTTTGATATTTATGTCCAGGGGACTCGTGTTTTTAAGGATT TTAACATACAGAAGGAAGCTGGTGGTATCTCTTACAGATCTGTCCAAAGGCAAGTTAGGGTTGAAGTGTCCGAAAACTATCTTGATATCCATCTCTTTTG GGCTGGAAAAGGGACTTGTTGCATACCAGAGCAAGGTACTTATGGACCCCTGATTTCAGCCATCAGTGCTATCCCAGATTTCAAACCTACTGTAAGTAAC AAACCTCCCAGCATTAACGAACCTCCAAGCGGCAACGAGCCTACTGTCACTGATAACCCTCCAAACAGTAAAAATAGTAGAGCCGGTCTAATTACGGGAA TTGTTGGTGGGGTTGGAGTTGCAAGCTTTCTATCTATCCTTGCTATTTTCTATATCAACCACAGAAGAAAACGCCGTGATGATAATGAAGAGCTTTTAGG TATTGATACAAAGCCATACACCTTCAGCTATTCCGAGTTAAAGAATGCTACGAATGACTTTATTCTTGGCAACAAGCTTGGAGAGGGAGGTTTTGGTCCT GTTTACAAGGGGACACTTGATGATGGAAGAGTTGTTGCTGTGAAACAACTATCTGTAGGATCCCATCAAGGAAAGAATCAGTTCATAACTGAGATCGCTA CTATATCCTCTGTACGACATCGTAATCTCGTAAAATTATATGGATGTTGCATAGAAGGGAGTAAAAGACTTATTGTGTATGAGTATCTAGAAAATAAGAG TCTTGATCAAACATTATTTGGAAATGGTGTAACTCTCAGTTGGTCCACGCGCTATGATATCTGTTTGGGTTTAGCAAGAGGTTTAACTTACCTACATGAA GAGTCACCTCTCCGTATTGTTCACCGTGATGTGAAGGCTAGCAACATTCTGCTTGATAGTGAGCTTGTTCCTAAAATATCTGATTTTGGGTTGGCCAAAT TATATGATGACAAAAAGACCCATATAAGCACCCGGGTTGCTGGGACAATTGGATATCTTGCACCGGAGTATGCCATGCGTGGACACCTTACAGAGAAAGC AGATGTGTTTTCTTTTGGAGTCGTAGCTCTAGAGGTAGTCAGTGGGAGGCCGAATTCTGATTCCAGTTTGGAAGGAGATAAGATTTATCTTCTAGAATGG GCTTGGAATATGCATGAGAGAAACTGCATAACTGAACTGGTGGATCCTCGACTATCAAAAGTTAACATGGAACAAGTTAATCGAATTGTAGGAGTAGCTC TTTTGTGCACTCAGACAGCACCATCGTTACGGCCATCGATGTCACGTGTAGTGGCGATGCTTACAGGAGATATTGAAGTGAGCACTGTAATTTCACGGCC TGGATACCTGACTGAGTGGAATTTCAATGATGTATCCAGCTTGATGACTGATATGGAAACCAAAGAATCAGGCACAAGTAATTACAATTTGTCACCAAGT ACAACCACAGTGGATAGTGCAAATCGTTCACCAATAGATGATTCAAGACCCATCCTTCATGAAACTTGGCATCAGTAGGTAAGAATTGGTGCTTTCATTT TGATTCAAGGTCATGTGTACTACAAAGAATGCCAGTGTCCCTCTCTTTTTACTCTTTTTTGCTTATACTCATACTGATTTTTTTCATCAGCTTTTTTGGC CTTTTGGTTATCTTATATCCTAACTTGTTTGTAATGTAAATAAGCATGTGTAAGTTACCATTTATTTTACTTATAAGGTTTCATAGAATGGCACCTCCAA TATGCTTAAATGTAACGAAAATTGTTAGCTCACTTTTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_160756; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_439544
| Blastp | Probable LRR receptor-like serine/threonine-protein kinase At1g56130 from Arabidopsis with 61.66% of identity |
|---|---|
| Blastx | Probable LRR receptor-like serine/threonine-protein kinase At1g56130 from Arabidopsis with 57.77% of identity |
| Eggnog | (E 0.0) leucine-rich repeat family protein protein kinase family protein(ENOG410XSG4) |
| Kegg | Link to kegg annotations (AT1G56130) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450589.1) |
| Pfam | Leucine Rich repeat (PF13516.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |