| Id Trinity | TRINITY_DN48400_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_364166 |
| Sequence | AGAATTGGGGTTTTTATGTTTTTTTATTACAGAGCTGATTCGTGGTTTTTCAATTCCAGTTGATACATTAATTAAGCTAAATGGTCTTACTTTGAAGAGT TTTTGCTGTTTCAGGCTTTTCTTTGAAGTTGGAGTTATTCTATTTAGGCACATTGAGAGTCACGAGTAGCATGTCAAGTAGGGGTGCTTCTCGAAAGACG TCCAAGGGCCGCCGATCATCAGCATCAGTTCAAGAAACTAGTGAAGTTCTTTTAATGAAAGGCCCATGGACAGTAGCAGAGGATGAAATTTTGACAGAAT ATGTCAGAAAACACGGAGAGGGAAACTGGAATGCAGTACAGAAGCATTCAGGACTTGTCCGTTGTGGGAAAAGCTGCCGTCTACGATGGGCAAATCATTT GAGACCTGATTTGAGAAAGGGTGCATTTACTTTAGAGGAAGAGGATCGAATCATCGAGCTCCATGCTAGAATGGGGAACAAGTGGGCTCGAATGGCTGCC GAGTTGCCAGGACGTACAGACAATGAGATAAAGAATTATTGGAACACAAGAAGTAAGAGAATGCAACGTGCTGGCTTACCACTCTATCCTAAGGAGATAT ACCTACGGGCGTTTAACAACAATCAAGAAAATCTAGACGTCGGCACCGTAAAAAATGAATCTGGCCAGGATGATGATGCCTCACAGACAGACAACTTTGA TATACCAGATCTTGATTTCAAAAATTACAAAATTCACCAGGATCTATCTTATGCACCAGCAATTTTTGATATACCTGAAAGCAACATGTTCAAACAACCT TCAGACTCATCCCACAGTTATAATGCCATGTCCCCAACAAATCCCAGAAAGCGCCTTCGAGAGCCAGATGTGTTATACAATAATAGTTTTGATGGTTACA TCAGTAATACTGTCCCATTATTTGATCAGTATGGCAATTACCCTAGCGAGAAAGTTTCTGACCATCCTAGGTTTTCTTCTCCATGCAATCTCATTCTTGA CACCGGTCAGTTCCATGGTTATGACTTTCCTGGCAGCCATGCCGCTCTAAATGGCAACACTTCTTCTTCTGCGCCCATAACCGGGGTCATGAAGTTGGAG CTCCCTTCACTCCAATATTTTGAAGACCAACAAGGTAGCTGGGGCATGCCTGCATCCCCACTTCCTTTGCTTGAGTCTGTTGATACATTGATTCAGTCTC CTCTAACTGATCCTGCTCTGTCGGATCCTGTTTCTCCACGGAGCAGTGGTTTGTTGGAAGCAGTAATCTGGCAATCCAAAAATTTGAAAGGCTCAAATAA TAATTCATTCGAACAGACACCCGGAAATTGTGTCTCCAATGAAGCAATCGACAGTTCAACCTTGAATCCTCCGATGACAGAATGTGATGAACAATGGGTG CTAAATTACCCCTTTGGTCAGTCTGCTGCTTCTGTTCTGACCAATTATACACCTATTAACTTGTGCTCAGTAGAGGGACCCCAATCAATTGAAACTACTC ACTTCATTTAATTGTAAATAATGATTGTGTTTTAATTTTAGCGAATTTCTTTAATAATGTTTTTTTTTGGCAGATCATGATATTAAGCACATATCAGTCC CACAGTTCCCACCAGCTTACTGTTCCTGGAATGATACAAAGTTGAGCAAGGTAGACCTTACAAGACCTGATGCTTTATTTGACGTTGCTTGGTATGGGAA TACCACTGAGTATAGCAAGGATCAAAATGTTCCAATAAATGCTTTAGATGACTTTCTAGGTGATGATTTCCAAGGTTAACTTGCAAGCAGGTGATTTGGA TATTATTGTTTTTCCCTCTGGTGCAGTACTTGTTCATGAGATGACTTATAGAAGTTCAAGTTTTTTCTATTCTCGGTCACTTTTAGAACCTTCATCTATG ATTCACAATAAATTTTAGATATCTCAATTTTATAGTCTTTTGAAGTTGATGATGTGCTTTCTTTCCCACTTTGACACTTTACATGGTGCTGATATTGGAA TAATGGTATTTTCAAATTGTTACATGCACAATTGAAAGAGGCTTATATTCCTTATTGCCATAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_160769; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_364166
| Blastp | Transcription factor GAMYB from Oryza sativa with 44.25% of identity |
|---|---|
| Blastx | Transcription factor GAMYB from Oryza sativa with 44.25% of identity |
| Eggnog | Myblike DNAbinding domain containing protein(COG5147) |
| Kegg | Link to kegg annotations (4327362) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441340.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |