Ll_transcript_364170

• Id Trinity: TRINITY_DN48400_c3_g1_i5
• Name Transcript: Ll_transcript_364170
• Sequence: AGAATTGGGGTTTTTATGTTTTTTTATTACAGAGCTGATTCGTGGTTTTTCAATTCCAGTTGATACATTAATTAAGCTAAATGGTCTTACTTTGAAGAGT TTTTGCTGTTTCAGGCTTTTCTTTGAAGTTGGAGTTATTCTATTTAGGTGAATCTCTAAGGCACATTGAGAGTCACGAGTAGCATGTCAAGTAGGGGTGC TTCTCGAAAGACGTCCAAGGGCCGCCGATCATCAGCATCAGTTCAAGAAACTAGTGAAGTTCTTTTAATGAAAGGCCCATGGACAGTAGCAGAGGATGAA ATTTTGACAGAATATGTCAGAAAACACGGAGAGGGAAACTGGAATGCAGTACAGAAGCATTCAGGACTTGTCCGTTGTGGGAAAAGCTGCCGTCTACGAT GGGCAAATCATTTGAGACCTGATTTGAGAAAGGGTGCATTTACTTTAGAGGAAGAGGATCGAATCATCGAGCTCCATGCTAGAATGGGGAACAAGTGGGC TCGAATGGCTGCCGAGTTGCCAGGACGTACAGACAATGAGATAAAGAATTATTGGAACACAAGAAGTAAGAGAATGCAACGTGCTGGCTTACCACTCTAT CCTAAGGAGATATACCTACGGGCGTTTAACAACAATCAAGAAAATCTAGACGTCGGCACCGTAAAAAATGAATCTGGCCAGGATGATGATGCCTCACAGA CAGACAACTTTGATATACCAGATCTTGATTTCAAAAATTACAAAATTCACCAGGATCTATCTTATGCACCAGCAATTTTTGATATACCTGAAAGCAACAT GTTCAAACAACCTTCAGACTCATCCCACAGTTATAATGCCATGTCCCCAACAAATCCCAGAAAGCGCCTTCGAGAGCCAGATGTGTTATACAATAATAGT TTGGACAGTCACATCAGCAGTGCCGTCCCATTATTTGACCAGTGTGGCAATCAGATATGTGAGAAAATTTCTGACCACCCTAGATTTCCTTCTCCAAATG ATCTCATTACTGACACTGGTCAGTTTCATGGTTATAACTTTGCTGGCAGCCATGCCGCCTTAAATGGCAATACTTCTTCTTCTGCGCCCATAATTGGGGC CATGAAGTTGGAGCTCCCTTCACTCCAATATTTAGAAAACCAACAAGGTAGCTGGGGCATTCCTCCATCTCCACTTCCTTCACTTGAGTCTGTTGATACA TTGATTCAGTCTCCTCCAACTGATCCTGCTCGGCCAGATCCTGTTTCTCCACAAAACAGTGGTTTGTTGGAAGCAATAATCTGGGAAGCAAAGAATTTGA AGAGGTCAAACAATAATTCATCGAAACAGACACCTGAAAATTGCATCCTCGATGAAGCATTCAAGAGTTCAAGCTTGAATCCCTGTAGGACAGAATGTGA TGAACAAGGGGATCTAAATTCCCCCTTAGATCAGTTTGATTATACTCGTATTAACTTCTGCTCACTGGATTGGCCCCAATCAATTGAAACCACTCAGGAT CATGATATTAGGCATGAATCAGTCGCACAGTTCCCAGCTTACTGTTCCGGGAAGGAAAAGTTGAGTAAGATAGACCTTACAGGGCCTGATGCTATATTTG AGCTTGATTGGTTTGACAATAGCATTGAGTCTAGCGAGGATCAATATTTTCTTAAAGATGTTTTAGATTCCTGTCTAGGTGAAGATTTGTAAGGTTGGCA CTGGTGAGCTCGTGATTTGGATATTGATTTACCCTCTAGTGCAGTATTTGTTCATGAGATGACTTAACTTGCCAAGTTTCTAACCACATTAGGTCAAGTT TTCCCCCTATTCTCAGTCACCTTTAGAACCTTCAACTATGATTGACAATACATTTTAGATATTTATGATGGTGATTCTATGCTTTTTCTCCCACTTTGTT ACTTTACGTGATGCTGAACTGGAAGAATGGTATTTGAAATTGTTATATGCACAATTGACAGAAACTGTGTATTCCTTCTTCAATTGTCATAAAGCTTATA TGCATGTTATTTAATTTTATTGGTTTTAATGTTATTACTCAACCAATTTAGGTTAATTTTTGC
• Tissue: pods
• Gene name: LI_gene_160769;
• Additional information: details;

Expression of Ll_transcript_364170

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0.1
• PS3: 0.5
• PW1: 0.3
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_364170

• Blastp: Transcription factor GAMYB from Oryza sativa with 44.36% of identity
• Blastx: Transcription factor GAMYB from Oryza sativa with 47.18% of identity
• Eggnog: Myblike DNAbinding domain containing protein(COG5147)
• Kegg: Link to kegg annotations (4327362)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426782.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;