Id Trinity | TRINITY_DN48400_c3_g1_i7 |
---|---|
Name Transcript | Ll_transcript_364184 |
Sequence | AGAAAGAACATTCCTTTTTCTGTAATTTCTTAGTTTGAAGTCCTGATAAAATCATCACCAGGTTCTTTCTCCATTGTGAATGGAAAAGGCAGATAATTTG GAAACTTATCCACCTTCTAGGAAACTGACTTATTCAACTACTATTTTTTCATTTTCGCTCACTTTGTATTTCTTTTCTATAGATTTTTAAAGTGTTTTTT ATATGAAGGAAGTAGGTTGGTTAATATTTTTGCGCTTTGTCATTCACTACAGAATTATGATCTATTTGTTAGGATGTGCGCTTACCCCCTCTTTGCATAA AATTTATAATTTTGGATTCTATAGTTATAGGCCTTAACTTGTGAGATAAACTGATATAAAAACAGCACTTATCTTACCCCCTCTTTGCATAAAATTTATA ATTTTGGATTCTATAGTTATAGGCCTTAACTTGTGAGATAAACTGATATAAAAACAGCACTTATCTTAACCCTAAAGTGATTCATCACTTTCTCTGTCCA AGAAAGAATAAAACATCAGAATGTGTCTATGGAAGCTCGACCTGATAAATCTGATTGGGAACGAATATGACCAGAGCCATGGCGAGATTATTTAAGTGAC ACAGCTTAAGCATGCTTCTTAGACATGCACACACATAGTGAAGGGGGAGTAGATTCTAGGCTGGAATGTACCAACATGATGGCTGTAATACCATTCTCTA CAATATATGGTTAAAGATTCCTTTTTGCCCGTGTCACTGAGCCAGATGTACTTTTCTTTGCATTTTCAGTTTGAAGTTGTCTGTGTTCTCATACTTTTTT CTTTGTTTCAGTTGCCAGGACGTACAGACAATGAGATAAAGAATTATTGGAACACAAGAAGTAAGAGAATGCAACGTGCTGGCTTACCACTCTATCCTAA GGAGATATACCTACGGGCGTTTAACAACAATCAAGAAAATCTAGACGTCGGCACCGTAAAAAATGAATCTGGCCAGGATGATGATGCCTCACAGACAGAC AACTTTGATATACCAGATCTTGATTTCAAAAATTACAAAATTCACCAGGATCTATCTTATGCACCAGCAATTTTTGATATACCTGAAAGCAACATGTTCA AACAACCTTCAGACTCATCCCACAGTTATAATGCCATGTCCCCAACAAATCCCAGAAAGCGCCTTCGAGAGCCAGATGTGTTATACAATAATAGTTTGGA CAGTCACATCAGCAGTGCCGTCCCATTATTTGACCAGTGTGGCAATCAGATATGTGAGAAAATTTCTGACCACCCTAGATTTCCTTCTCCAAATGATCTC ATTACTGACACTGGTCAGTTTCATGGTTATAACTTTGCTGGCAGCCATGCCGCCTTAAATGGCAATACTTCTTCTTCTGCGCCCATAATTGGGGCCATGA AGTTGGAGCTCCCTTCACTCCAATATTTAGAAAACCAACAAGGTAGCTGGGGCATTCCTCCATCTCCACTTCCTTCACTTGAGTCTGTTGATACATTGAT TCAGTCTCCTCCAACTGATCCTGCTCGGCCAGATCCTGTTTCTCCACAAAACAGTGGTTTGTTGGAAGCAATAATCTGGGAAGCAAAGAATTTGAAGAGG TCAAACAATAATTCATCGAAACAGACACCTGAAAATTGCATCCTCGATGAAGCATTCAAGAGTTCAAGCTTGAATCCCTGTAGGACAGAATGTGATGAAC AAGGGGATCTAAATTCCCCCTTAGATCAGTTTGATTATACTCGTATTAACTTCTGCTCACTGGATTGGCCCCAATCAATTGAAACCACTCAGGATCATGA TATTAGGCATGAATCAGTCGCACAGTTCCCAGCTTACTGTTCCGGGAAGGAAAAGTTGAGTAAGATAGACCTTACAGGGCCTGATGCTATATTTGAGCTT GATTGGTTTGACAATAGCATTGAGTCTAGCGAGGATCAATATTTTCTTAAAGATGTTTTAGATTCCTGTCTAGGTGAAGATTTGTAAGGTTGGCACTGGT GAGCTCGTGATTTGGATATTGATTTACCCTCTAGTGCAGTATTTGTTCATGAGATGACTTAACTTGCCAAGTTTCTAACCACATTAGGTCAAGTTTTCCC CCTATTCTCAGTCACCTTTAGAACCTTCAACTATGATTGACAATACATTTTAGATATTTATGATGGTGATTCTATGCTTTTTCTCCCACTTTGTTACTTT ACGTGATGCTGAACTGGAAGAATGGTATTTGAAATTGTTATATGCACAATTGACAGAAACTGTGTATTCCTTCTTCAATTGTCATAAAGCTTATATGCAT GTTATTTAATTTTATTGGTTTTAATGTTATTACTCAACCAATTTAGGTTAATTTTTGC BLAST |
Tissue | pods |
Gene name | LI_gene_160769; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_364184
Blastp | Transcription factor GAMYB from Oryza sativa with 37.18% of identity |
---|---|
Blastx | Transcription factor GAMYB from Oryza sativa with 37.27% of identity |
Eggnog | Myblike DNAbinding domain containing protein(COG5147) |
Kegg | Link to kegg annotations (4327362) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426782.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |