| Id Trinity | TRINITY_DN48404_c1_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_361978 |
| Sequence | TTTTAATACTTTGTTATCTCAAACTCCTACAAGTGTGTATGCTCAACCTCATTTTACTTCCCTATTCTTATATAAATCCACTTTCTTCTTTCTTCTCCTT AATCATTCAACTCTCAAACCCCTCTACACCTATTTTAGTTACCTCTCACTCAAGCTTCAGATTTTTTCAAAGAGTGTTTCTTGTTTCGGAAAAATGTATG CTGAGACAGGTCTTTTCTTCCCATACTTGCAGAACTTCTCTCCAGAGCTTCTTCAACTTGAAGAGTACTGCAAAACCCACAAATCTAATGTTTCAATGAG TGACCTTGTACAGTCATCTGCCATGTCAGAGTACGATTTTGCAGCAGAGGGAGATCTGTTCAAAGCACCCGAACCAATCATTGAAGAGCCATTCTTGGAC CTGGATCCTATGACAGCATCAATCTCAGTTATGTCTCGCGGAGACGATATCTCGTCACAGGGATTTCAATCTACAGATATCGATGTTCTTCAAAAAGAGC AGCTTCTAAGCGACATGTTGTATGAGTGCGAAAAGGATCTCTTAGAAAAGGCTGCAATTGAATCACCACTTTCCGAGATTCTGGAAATCAAGGTTCCTTC GCTGAACTTAGATGAGTATTCAATTCAAGAAGACAAACCATTCCCTGACACGCCATTCCCAAAGAGCGTTAGTTCAGCAAGTTTGAGCTCATTGGACTGG ATGCATGGAGCTGCAGTGAAGCCTGCTTTCCTTGATTTCTCAGGAATAGATTTCAATTCAGTTTACGGCATGCGAAGATCTTTTAGTGAAGGAGATATAA AGACTCTTGAAAATTGTAATGGTAATATGAACATCGTCCAATCTCCCCATGAGAGGCCTTTTCTTATTAGCAACTGCACCGGCGAGGAACGTCAAGAAAA ACTTTCCAGATACAGGAACAAGAAGTCGAAGAGGAATTTCAGCAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGATAGTCAACCAAGATTCCGT GGAAGATTTGCAAAGACCGAAGAATCCGATGCGAAAAGGCAATAACTCGTAACTGATCCAGAAGGAAGAAAAGAAAATAGGAAACCATGTAGCTATATCT GATCAAGCTATATGGAAGAGCTCAGCAGCAATATGTGCTTGGAAATCATGTACTTGGTAGAGTTCTATAAGTTTGAACAGATATTTCCAAATAAACCAGA CCTTAACTTAAACTCCTTAGGTAGATCATCTCTTATCTGTTGTAATAATATTCTATGTAGACTGAAATTACCTTCTAGATGTGTAAGTAGGTTTGATAAA TAAACAAGCGGCATAGTGCACCGCCTAGCAGGATTCTCGGATGGTAGATGCATATAAGCTTACTTAAATTGTATAAAATTGAAGCGAGTGAATTACATAC GCAGTACGTGAAAGTTAGAGTAACTCTTCTCTACCGTAGGTTGTGGTCGGGTTAGACTCTAACAAAAATTGTTAGAATGGGGAATAGTTCCGTGACCATA TCGGAGAGAATGTACATTTTCAACAAACTTACGCATGAATAACCCAACCTTTTCTCGCAAATGATTTATAAAATGTCAGACCAGACACTGTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_160808; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_361978
| Blastp | Transcription factor GHD7 from Oryza sativa with 51.02% of identity |
|---|---|
| Blastx | - |
| Eggnog | Transcription factor(COG5641) |
| Kegg | Link to kegg annotations (107276161) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415863.1) |
| Pfam | CCT motif (PF06203.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |