| Id Trinity | TRINITY_DN48408_c2_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_364466 |
| Sequence | AAAGTTTTGTGTATTGTTACAATGGGTAATGAAGAAGCTAGTTATAATCTACTTGAAGAAAGCACAACAATGAATAATCACAACATGGATGAAGTAGTTG AAGAAAGAGATCCAGAACACAATCCATTGAATGAGCCACTACTAATCAAAAGGAACAGAACTCTTTCTGGAAATCCACTTGCTTTGGTTGGATCAAAAGT TTCATACATAGAAAGCTTGGACTATGAGATCAATGAGAATGATCTATTCAAACAAGATTGGAGGAGTAGATCAAGAACTCAAGTGTTGCAATATATATTC TTGAAATGGTTACTTGCATTCCTTGTTGGATTTCTTACTGGTATTATAGCTACTCTTATCAACCTTGCTATTGAGAACATTGCAGGGTACAAGCTTCTTG CTGTTGTTGATTACATCCAAAATGAAAGGTTTCCTATTTTTCATGGGCTTGAATTTGGTATTGACATTGATTGCTGCTATGCTGTGTGTGTGTTTTGCAC CCACAGCAGCTGGACCTGGAATACCAGAAATCAAAGCTTATCTTAATGGTGTTGATACTCCCAACATGTATGGTGCCAATGTTTTGTTTGTCAAGATATT TGGAAGCATTGGAGCTGTCTCTGCAGGCTTAGATTTAGGAAAAGAAGGACCCTTGGTACATATTGGCAGCTGCATTGCTTCCTTACTAGGCCAAGGAGGC CCTGACAGCTACCGAATAAAATGGCGATGGCTGCGATATTTCAACAACGATCGTGACCGTCGTGATCTTATCACAAGTGGTGCTTCTTCAGGAGTTTGTG CAGCTTTCAGGGCCCCTGTAGGAGGAGTTCTCTTTGCTCTAGAAGAGGTAGCAACTTGGTGGAGAAGTGCACTTCTTTGGAGAACTTTTTTCAGCACTGC TGTGGTTGTTGTAGTACTAAGGGCCTTCATAGAACTATGCCATGAAGGGAAATGTGGTCTTTTTGGTGCAGGAGGGCTTATCATGTTTGATGTGAGCAAT GTCAGTGTGAGTTACAATGTGATGGGTATGATCCCTGTTGTAATCATTGGAGTCATTGGTGGGGTATTAGGAAGCCTTTATAACCATCTTCTCCACAAGG TCCTCCGTCTCTACAATCTCATCAATCAGAAAGGAAAAATGTACAAGCTTCTCCTAAGTCTTGCAGTTTCACTCTTCACATCAGTGTGCCAATATGGGCT CCCATTCCTAGGAAATTGCACTCCCTGTGATCCATCACTTCCGGAGTCCGTCTGCCCCACGAATGGACGGTCTGGAAATTACAAACAATTCAACTGCCCA AAAGGCCATTACAATGATCTTGCTACTCTCCTTCTTACCACTAATGATGATGCTGTCAAAAACATATTCTCAACCAACACTCCTCTTGAATACCAGCCAA CCTCCATCATAATTTTCTTCGTGCTCTATTGCATATTAGGACTAATCACCTTTGGAATTGCGGTACCATCTGGTCTCTTCCTCCCAATCATACTTATGGG TTCGGGTTATGGCCGCCTTCTTGGCATCATCATGGGACCTCATACAAACATTGACCATGGATTGTTAGCAGTTCTTGGTGCAGCCTCCCTCATGGCTGGT TCTATGAGGATGACTGTATCCCTTTGTGTGATATTTCTCGAACTAACAAACAACCTTCTCCTACTACCGATAACCATGATTGTTCTTCTAATAGCCAAAA CTGTTGGAGACAGTTTCAACCCAAGCATCTATGATATCATACTCCACCTAAAAGGCCTTCCATTCATGGATGCAAATCCTGAGCCATGGATGAGAAATCT CACAGTTGGGGATCTTGTTGATGTAAAGTCACCCGTGATTACCCTTAGCGGAGTAGAAAAGGTGTCGAATATAGTTGATGCCTTGAAAAACACTACACAT AATGGTTTTCCTGTGATGGATGATAGGGTAGTACCACCAACAGGACTGGCTAGTGAGGCAAAAGAACTGCATGGGCTGATTCTCAGAGCACATCTCATCC AAGTGCTAAAGAAGAAGTGGTTCTTGAAAGAGAGAAGGAGAACTGAAGAGTGGGAAGTTAGAGAGAAATTTACTTCTGTGGAACTTGCTGAAAGAGAAGG GAATATTGAAGAGGTGGCTGTGACAAGAAATGAAATGGACATGTTTGTTGATCTACATCCTCTTACCAATACAACCCCTTTTACAGTGTTAGAGAGCATG TCAGTAGCAAAAGCAATGCTCCTCTTCAGACAAGTAGGACTTCGCCATATGCTCGTCGTACCCAAGTATCAAGCAACCGGGGTATCTCCTGTAATTGGGA TCTTGACCAGGCAGGATCTATTGGCACACAACATTCTGTCAGTCTTTCCTCACCTGGCAAAACCTAAGGGCAGAGAAAAGAAGAATTGAACCTCTCATGA TTGGTCAATGCCAAGCAGCTTTGTTGTGACAAGACTTGTTTTTCAATTCCACAGAAATTTTTTTCCTCAGTTTTGTATTACTTGAACCAAAGAACAGAGA TGGGTAAGATAAAGGAGCCATGTAAAACAATATTCAAAATTTACTATTCTTTTCACACTAGTTTTTACAAATACTTAAACTAAATCCTCTCTCCTACCAG TACAAGTAACCAAATAAAAAGAGGCAATGGTAACTTCCGGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_160835; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_364466
| Blastp | Chloride channel protein CLC-b from Arabidopsis with 79.17% of identity |
|---|---|
| Blastx | Chloride channel protein CLC-b from Arabidopsis with 78.92% of identity |
| Eggnog | chloride channel(COG0038) |
| Kegg | Link to kegg annotations (AT3G27170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427969.1) |
| Pfam | Voltage gated chloride channel (PF00654.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |